DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpoz1-ps4

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_063138886.1 Gene:Tdpoz1-ps4 / 365851 RGDID:1564513 Length:364 Species:Rattus norvegicus


Alignment Length:357 Identity:187/357 - (52%)
Similarity:250/357 - (70%) Gaps:2/357 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 AENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDY 538
            |:::.||.:.|.||.|.|||:|||||.:.:.|.:.|..||..|:::::||:|::|.|:|||||||
  Rat     7 AKSYGYTHISVQKFCYEWTISNFSFCMDGIRENIASPVFSLEASEEVQWCMRIHPNGVDEESKDY 71

  Fly   539 LSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANG 603
            ||:||.||||.:|.|.||.:|.|:||:.|:.:..:.....||:..:.||:||||.|||||...:.
  Rat    72 LSVYLSLVSCPESPVWAKVQFWIINAQGEKHQVKKIPNVLRFLPKEQWGYKKFILRDFLLSHRDW 136

  Fly   604 LLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQA 668
            ||||::||:.|:||||....:..||:.....:.|...|::.||:|::|..|:|.:|.|.|:||:|
  Rat   137 LLPENQLTLCCKVSVVGPFFSTPGQNMKPAIRDPMQMLADGLGDLWENSVFTDCSLVVAGQEFRA 201

  Fly   669 HKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAA 731
            |||||||||.||.|||||||.|...|||.|.|:...|.|||:.||||||||||  ..||..||||
  Rat   202 HKAILAARSPVFRAMFEHEMLENLTNRVEIHDIHLHVFKEMMGFIYTGKAPNLHNHSMATGLLAA 266

  Fly   732 ADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNM 796
            ||.|.|:.||||||:|||.|||||.|..|||||||||.:.||.:.:|||..||::|.||..|::|
  Rat   267 ADMYDLQDLKVMCEDALCRNLSVENAVSTLILADLHSTEHLKTKAMDFIILHASEVSETLAWKSM 331

  Fly   797 ITTHSHLIAEAFRALATQQIPPIGPPRKRVKM 828
            :.:|.||:.||||:|.:.|.|.:.|..||.|:
  Rat   332 VESHPHLVEEAFRSLDSIQCPFLEPSLKRRKI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 70/137 (51%)
BTB_POZ_roadkill-like 637..757 CDD:349654 76/121 (63%)
BACK_roadkill_like 752..825 CDD:350595 37/72 (51%)
Tdpoz1-ps4XP_063138886.1 None

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