DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and LOC3290238

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_565412.3 Gene:LOC3290238 / 3290238 VectorBaseID:AGAMI1_001347 Length:399 Species:Anopheles gambiae


Alignment Length:160 Identity:47/160 - (29%)
Similarity:77/160 - (48%) Gaps:6/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV 705
            |:..:..|...|..:|||..|......||:.||||||:.|.|:....:||.|...:|: .|..:.
Mosquito    33 LAIHIAGLCMKEDKADVTFVVEKERIPAHRVILAARSEYFQALLYGGLEETKQTEIAL-QVPLQP 96

  Fly   706 LKEMLRFIYTGKAPNLEKMAD----DLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADL 766
            .:.:||:||:| :.:|:.|.|    |.|..|.:|....::......|.:::||......|....|
Mosquito    97 FQYLLRYIYSG-SMSLKDMKDEDILDTLGLAIQYGFPSVEKAIINYLSLHVSVGNVCAILDAGRL 160

  Fly   767 HSADQLKAQTIDFINTHATDVMETSGWQNM 796
            .....|.|...:|::.:|.||:....:||:
Mosquito   161 FDLADLLAVCDEFVDRNALDVLRHETFQNL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 37/119 (31%)
BACK_roadkill_like 752..825 CDD:350595 12/45 (27%)
LOC3290238XP_565412.3 None
Blue background indicates that the domain is not in the aligned region.

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