DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and LOC3290214

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_061504817.1 Gene:LOC3290214 / 3290214 VectorBaseID:AGAMI1_011542 Length:400 Species:Anopheles gambiae


Alignment Length:158 Identity:46/158 - (29%)
Similarity:72/158 - (45%) Gaps:10/158 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   645 LGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEM 709
            ||.|..::.:||||..|......||:||||.|.:.|.|:....:||.|...:.: ||.....|.:
Mosquito    17 LGELCISDDYSDVTFVVENERISAHRAILAVRCEYFRALLYGGLEESKQTEITL-DVSSTAFKHL 80

  Fly   710 LRFIYTGKAPNLEKMADD---LLAAADKYALEKLKVMCEEALCVNLSVE---TAAETLILADLHS 768
            ||:||||.....:...||   ||....:|.:........:.|...|:||   |.|:...|.||  
Mosquito    81 LRYIYTGSLELKDMEVDDILTLLGLVHQYGITAFVKAISDYLYGVLTVENVCTIADEARLLDL-- 143

  Fly   769 ADQLKAQTIDFINTHATDVMETSGWQNM 796
             ..|..:..:||:.:...:::...:..:
Mosquito   144 -KDLMEKCYEFIDENTRSIIQQESFSKL 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 38/117 (32%)
BACK_roadkill_like 752..825 CDD:350595 11/48 (23%)
LOC3290214XP_061504817.1 None
Blue background indicates that the domain is not in the aligned region.

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