DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and CG7058

DIOPT Version :9

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_573327.2 Gene:CG7058 / 32873 FlyBaseID:FBgn0030961 Length:1062 Species:Drosophila melanogaster


Alignment Length:504 Identity:98/504 - (19%)
Similarity:164/504 - (32%) Gaps:200/504 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 LPVNECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVNTPV----------------AENWCYT 480
            ||:.:.||...  :...|.     :|....|| |.|....||                |||    
  Fly   576 LPLQQQQAEDA--IVMQLQ-----IADGGEPS-PRPRRGAPVGLTLYDNLSDKQRLSSAEN---- 628

  Fly   481 QVKVVKFSYMWTINNF-------------------SFCREEMGEVLKSST--------------- 511
            .:|.|  .||:.:...                   :||  ||..:.||||               
  Fly   629 DLKFV--LYMYEVRKMRDIYGRIVAALEIIKDKKTTFC--EMDFLSKSSTINQNLEQLIMDIPAY 689

  Fly   512 ------FSAGANDKLKW-----CLR--------VNPKGLDEES--KDYLSLYLLLVSCNKSEVRA 555
                  .|...:|||.|     |.:        |..|.|:.:.  :|.:|...:||.      :.
  Fly   690 IFIVENLSDRLDDKLGWKEFKFCFKLATSQINGVIAKLLEHKDALRDAISQICMLVR------KQ 748

  Fly   556 KFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN----GLLPEDKLTI---- 612
            :|..|::.....:...:.|....                  :.|..|    ||..:|.:.:    
  Fly   749 EFTQSVIELGLLDDTCLLSNNLK------------------MADHENNLNQGLSEKDSMYLDRKQ 795

  Fly   613 --------------FCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSV-- 661
                          .||..:.|.|                 .||::...|..:.:.:|:...|  
  Fly   796 YYDYNSIKLNLIRHLCEPPIAASS-----------------NLSKNALRLLHSTQLADMEFEVHT 843

  Fly   662 -----------GGRE-----------------FQAHKAILAARSDVFAAMFEHEMEERKLNRVAI 698
                       ||.|                 |:||:.|:|||.:.|.......|:|....:|.|
  Fly   844 YAPTSGAAKSGGGTEAVPETAEPAAKVLQVHSFKAHRVIVAARCEWFKKALMSGMQESINRKVII 908

  Fly   699 TDVDHEVLKEMLRFIY---TGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAET 760
            ||....:.:.:|.::|   ..:....|::. :|:..||:|:::.||.:||..|...:..::....
  Fly   909 TDTSPVIFRRLLLYLYGAPIDRTVGAEQVC-ELMLLADRYSIDDLKELCENTLYSLIDEDSVVCL 972

  Fly   761 LILADLHSADQLKAQTIDFINTHA----------------TDVMETSGW 793
            |.:||.:.|..||::.:.|::.||                .:||:...|
  Fly   973 LGIADRYMATALKSKCLSFLSQHAQLTKCEIFKELPQTLQLEVMDLIHW 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 35/214 (16%)
BTB 645..749 CDD:279045 31/136 (23%)
BTB 656..752 CDD:197585 31/128 (24%)
SPOP_C 752..814 CDD:269807 12/58 (21%)
CG7058NP_573327.2 BTB 870..964 CDD:197585 26/94 (28%)
BTB 870..960 CDD:279045 25/90 (28%)
SPOP_C_like 964..1016 CDD:269810 9/51 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1987
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24413
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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