DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdx and klhl41b

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_945330.1 Gene:klhl41b / 321064 ZFINID:ZDB-GENE-030131-9875 Length:605 Species:Danio rerio


Alignment Length:152 Identity:40/152 - (26%)
Similarity:73/152 - (48%) Gaps:6/152 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAM-FEHEMEERKLNR-VAITDVDH 703
            |.:.|..|.:..||.|.||.:|.|.|..|:.|:||.|..|..: |..:.:|:.:.: |.:.|||.
Zfish    18 LQDGLKELLNENKFVDCTLKIGDRCFPCHRLIMAACSPYFRELFFSEDGKEKDIGKEVVLDDVDP 82

  Fly   704 EVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHS 768
            .::..:|:::|:.:...::....::.|.|:::.:..:..:|...|...||:........|..:.|
Zfish    83 NIMDMILQYLYSAEIDLVDDNVQEIFAVANRFQIPSVFTVCVNYLQQKLSMANCLAVFRLGLVLS 147

  Fly   769 ADQLKAQTIDFINTHATDVMET 790
            ..:|.....|||    .|..||
Zfish   148 VPRLAIAARDFI----ADRFET 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 31/117 (26%)
BACK_roadkill_like 752..825 CDD:350595 11/39 (28%)
klhl41bNP_945330.1 BTB_POZ_KLHL41_KBTBD10 5..139 CDD:349650 31/120 (26%)
PHA03098 46..528 CDD:222983 29/124 (23%)
BACK_KLHL41_KBTBD10 131..229 CDD:350592 11/39 (28%)
Kelch 1. /evidence=ECO:0000255 345..397
KELCH repeat 387..432 CDD:276965
Kelch 2. /evidence=ECO:0000255 398..446
KELCH repeat 436..481 CDD:276965
Kelch 3. /evidence=ECO:0000255 447..494
KELCH repeat 484..529 CDD:276965
Kelch 4. /evidence=ECO:0000255 496..541
KELCH repeat 531..578 CDD:276965
Kelch 5. /evidence=ECO:0000255 543..598
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.