DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpozl1

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_227351.2 Gene:Tdpozl1 / 310596 RGDID:1565369 Length:360 Species:Rattus norvegicus


Alignment Length:349 Identity:178/349 - (51%)
Similarity:242/349 - (69%) Gaps:2/349 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 YTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYL 543
            ||.:.|.||.|.|||:|||||.:.:.|::.:..||..||::::||||:.|.|:|||||||||:.|
  Rat    12 YTHISVQKFCYKWTISNFSFCMDGIYEIITNPVFSLEANEEVQWCLRIFPNGVDEESKDYLSVCL 76

  Fly   544 LLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPED 608
            .|:||.||.|.||.:|.|:||:.|:.:..:.....||:..:..|.:|||.|||||...:.|||||
  Rat    77 GLLSCPKSPVWAKVQFWIINAQGEKHQITKIPNVLRFLANQHQGVRKFILRDFLLSHRHWLLPED 141

  Fly   609 KLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAIL 673
            :|.:.|:||:|..|.:...|:.....|.|...|:.|:|.|::|..|:|.:|.|||:||:||||||
  Rat   142 QLILCCKVSIVGPSFSRPEQNMTPAIKDPTQMLANDVGELWENSLFTDCSLVVGGQEFRAHKAIL 206

  Fly   674 AARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAAADKYA 736
            ||||.||.|||||||.|...||:.|.|:..:|.|||:.||||||||:|  ..||..|||||||:.
  Rat   207 AARSPVFRAMFEHEMLENLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATGLLAAADKFD 271

  Fly   737 LEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHS 801
            |:.||:|||::||.||||:.|..||||||||||:.||:..:|||..||::|.:|..|::|:.:|.
  Rat   272 LQHLKIMCEDSLCRNLSVKNAVPTLILADLHSAEHLKSMAMDFIILHASEVSKTLEWKSMVESHP 336

  Fly   802 HLIAEAFRALATQQIPPIGPPRKR 825
            ||:.|||.:||:.|...:.|..||
  Rat   337 HLVEEAFHSLASMQCFFLEPSLKR 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 67/137 (49%)
BTB_POZ_roadkill-like 637..757 CDD:349654 72/121 (60%)
BACK_roadkill_like 752..825 CDD:350595 35/72 (49%)
Tdpozl1XP_227351.2 MATH 16..153 CDD:445786 66/136 (49%)
BTB_POZ 165..292 CDD:453885 73/126 (58%)
BACK 287..353 CDD:475122 34/65 (52%)

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