DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Spopl

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001418499.1 Gene:Spopl / 296532 RGDID:1305847 Length:424 Species:Rattus norvegicus


Alignment Length:424 Identity:293/424 - (69%)
Similarity:333/424 - (78%) Gaps:52/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 VSRVPSPPLP-EVNT-PVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKL 520
            :||.|:|||| :::| ||||:|||||||||||||||||||||||||||||||||||||:|.|||:
  Rat     1 MSREPTPPLPGDMSTSPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKM 65

  Fly   521 KWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKD 585
            |||||||||||||||:||||||||||||.|||||||||||:||||||||||||||||||||||||
  Rat    66 KWCLRVNPKGLDEESRDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKD 130

  Fly   586 WGFKKFIRRDFLLDEANGLLPEDKLTIFCE--------------------------------VSV 618
            |||||||||||||||||||||:||||:|||                                |||
  Rat   131 WGFKKFIRRDFLLDEANGLLPDDKLTLFCEHLQHCLQKRWKHCTALPKELAPPLHCKWCCRQVSV 195

  Fly   619 VADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAM 683
            |.||||:||.:|....|||||:|:||||||::|.:|:|....|.|:||:|||::|||||.||.||
  Rat   196 VQDSVNVSGHTNTNTLKVPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAM 260

  Fly   684 FEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEAL 748
            |||||||...|||.|.|:|.||.|||:||:||||||||:||||:|||||||||||:|||||||||
  Rat   261 FEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDKMADNLLAAADKYALERLKVMCEEAL 325

  Fly   749 CVNLSVETAAETLILADLHSADQLKAQTIDFI------------------NTHATDVMETSGWQN 795
            |.|||||..|:||:|||||||:|||||.||||                  |..|||:||||||::
  Rat   326 CSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKS 390

  Fly   796 MITTHSHLIAEAFRALATQQIPPIGPPRKRVKMS 829
            ||.:..||:||||||||:.|.|..|.||||:|.|
  Rat   391 MIQSRPHLVAEAFRALASSQCPQFGIPRKRLKQS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 129/169 (76%)
BTB_POZ_roadkill-like 637..757 CDD:349654 87/119 (73%)
BACK_roadkill_like 752..825 CDD:350595 50/90 (56%)
SpoplNP_001418499.1 MATH 28..160 CDD:445786 123/131 (94%)
BTB_POZ 211..333 CDD:453885 88/121 (73%)
BACK_SPOPL 329..424 CDD:350594 53/94 (56%)

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