DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpoz1-ps1

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_063138887.1 Gene:Tdpoz1-ps1 / 295199 RGDID:1560661 Length:359 Species:Rattus norvegicus


Alignment Length:342 Identity:173/342 - (50%)
Similarity:235/342 - (68%) Gaps:3/342 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 YTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGAN-DKLKWCLRVNPKGLDEESKDYLSLY 542
            |....|.||.|.|||:|||.|.:.:.|.:.|..||..|| ::::||||::|.|:|||||||||:|
  Rat    12 YIYSSVQKFCYEWTISNFSVCMDGILENITSPVFSLEANAEEMQWCLRIHPNGIDEESKDYLSVY 76

  Fly   543 LLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPE 607
            |.|:||.:|.|.|.|:|.|:||:.|:.:.::.....:|:..:.||.||||.|||||...:.||||
  Rat    77 LWLLSCPESPVWATFQFWIINAQGEKYQIIKVPNVLKFLPNQKWGHKKFILRDFLLFYRHWLLPE 141

  Fly   608 DKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAI 672
            |:||:.|:|.:|....:..||:.....:.|...|::|||.|::|..|:|.||.|.|:||:.||||
  Rat   142 DQLTLCCKVCIVGPVFSRPGQNMTPAIRDPRQMLADDLGELWENPLFTDCTLVVAGQEFRDHKAI 206

  Fly   673 LAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAAADKY 735
            |||.|.||.|||||||.|...||:.|.|:..:|.|||:.||||||||:|  ..||..||:.||.|
  Rat   207 LAAHSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHIHSMATGLLSVADMY 271

  Fly   736 ALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTH 800
            .|:.||||||:|||.||||:.|..||||||||:||.||.:.:|||..||::..||.||::|:.::
  Rat   272 DLQDLKVMCEDALCRNLSVKNAVPTLILADLHNADHLKTKAMDFIILHASEFSETMGWKSMVESY 336

  Fly   801 SHLIAEAFRALATQQIP 817
            .||:.|||.:|::.|.|
  Rat   337 PHLVEEAFHSLSSIQCP 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 68/138 (49%)
BTB_POZ_roadkill-like 637..757 CDD:349654 71/121 (59%)
BACK_roadkill_like 752..825 CDD:350595 34/66 (52%)
Tdpoz1-ps1XP_063138887.1 None

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