DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Klhl25

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001034095.1 Gene:Klhl25 / 293023 RGDID:1310815 Length:589 Species:Rattus norvegicus


Alignment Length:200 Identity:59/200 - (29%)
Similarity:89/200 - (44%) Gaps:19/200 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 SGQSNIVQF---KVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHE 687
            :|..||..|   ..|:|.|:. |..|..:..|:||||..|.|.|..|:|:|||.|..|.|||.|.
  Rat    15 TGSMNISVFHKASHPDCVLAH-LNTLRKHCMFTDVTLWAGDRAFPCHRAVLAASSRYFEAMFSHG 78

  Fly   688 MEERKLNRVAITDVDH-EVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVN 751
            :.|.:.:.|...|..| |||:.:|.|.|:.:....|:.|:.||.|.|......::....|.|..|
  Rat    79 LRESRDDTVNFQDNLHPEVLELLLDFAYSSRIVINEENAESLLEAGDMLQFHDVRDAAAEFLEKN 143

  Fly   752 LSVETAAETLILADLHSADQL--------------KAQTIDFINTHATDVMETSGWQNMITTHSH 802
            ||.......::|:|.|...:|              ..|:.||.:.....:::......:.|....
  Rat   144 LSPSNCLGMMVLSDAHQCRRLYEFSCRMSLVHFETVRQSEDFNSLSRDTLLDLISRDELETEDER 208

  Fly   803 LIAEA 807
            ::.||
  Rat   209 VVFEA 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 45/120 (38%)
BACK_roadkill_like 752..825 CDD:350595 11/69 (16%)
Klhl25NP_001034095.1 BTB_POZ_KLHL25 24..151 CDD:349563 45/127 (35%)
PHA03098 39..566 CDD:222983 50/174 (29%)
Kelch 1 296..340
KELCH repeat 330..374 CDD:276965
Kelch 2 341..388
KELCH repeat 378..431 CDD:276965
Kelch 3 389..444
KELCH repeat 434..480 CDD:276965
Kelch 4 446..492
KELCH repeat 482..525 CDD:276965
Kelch 5 493..538
KELCH repeat 528..573 CDD:276965
Kelch 6 539..585
Blue background indicates that the domain is not in the aligned region.

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