DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and bath-41

DIOPT Version :9

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_498473.1 Gene:bath-41 / 175946 WormBaseID:WBGene00018137 Length:418 Species:Caenorhabditis elegans


Alignment Length:384 Identity:89/384 - (23%)
Similarity:158/384 - (41%) Gaps:41/384 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 SRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCRE--EMGEVLKSSTFSAGANDKLK 521
            ||.||....:..:|...:.|.|.:....|:..|::..|:...|  ...|.:.:..|..|   ..:
 Worm    18 SRSPSGKSEKRKSPSIVSGCRTVMNERSFTNYWSVERFTVQLELHNPAEFMLAPKFGDG---DYE 79

  Fly   522 WCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREET----KAMESQRAYRFVQ 582
            :.:::.|.|.|||:..||||:||:..|....:|.:..|::..|....:    |.:.:......|.
 Worm    80 FVMKLFPNGKDEETAGYLSLFLLINKCPNPRLRFRVSFTVETADGPRSCHLNKNLVTINRSGIVT 144

  Fly   583 GKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVAD----------------SVNISGQS-- 629
            .     .||...|.|....|..:|.|.|||.||:::..:                |.:.:.:|  
 Worm   145 A-----SKFFSLDILRSAMNVYIPNDILTIGCELTIFGECTTQISSLFKPYQRTHSASSTSRSLS 204

  Fly   630 --NIVQFKVPECKLSEDLGNLFDNEKFSD-VTLSVGGREFQAHKAILAARSDVFAAMF-EHEMEE 690
              |....|:.|....:.........:||| :.::..||||..|..||||||:.|..:. .|..:|
 Worm   205 SPNTKCLKIDESSAHDAFTEFLSTGEFSDFIIVASCGREFPTHMCILAARSEYFKVLLRNHSTKE 269

  Fly   691 RKLNRVAITDVDHEVLKEMLRFIY---TGKAPNLE--KMADDLLAAADKYALEKLKVMCEEALCV 750
            ....|:...|:....|..:||.:|   .|:...||  ::.:||::|.|:..:..|:......:..
 Worm   270 FMSKRLQFDDISARTLDVLLRHMYASAAGRVVKLEEDQLTEDLISAMDRLMINSLRDEVARLIGS 334

  Fly   751 NLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFR 809
            .::|:.....:.:|.....|......:||.:.|..:.|:.:.|..:.:....|..:..|
 Worm   335 KVTVDNVLTRISMAAELRLDDTYDVLLDFFSNHKHECMKLTAWDELESAKPPLAIKILR 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 36/143 (25%)
BTB 645..749 CDD:279045 31/110 (28%)
BTB 656..752 CDD:197585 29/102 (28%)
SPOP_C 752..814 CDD:269807 10/58 (17%)
bath-41NP_498473.1 MATH 43..178 CDD:295307 36/142 (25%)
BTB 222..332 CDD:279045 31/109 (28%)
BTB 233..332 CDD:197585 29/98 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1987
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D864323at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24413
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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