DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdx and gprs

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_061514418.1 Gene:gprs / 1280431 VectorBaseID:AGAMI1_000813 Length:1295 Species:Anopheles gambiae


Alignment Length:715 Identity:132/715 - (18%)
Similarity:213/715 - (29%) Gaps:244/715 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 STPPVLLRRSSLQQQQHQQQQHHPHT--------------------------------------- 122
            |..|..|..:|.:...|.|..|.|::                                       
Mosquito   312 SVDPGKLSPNSSRHHHHSQHLHQPNSGGSSSSRSLPKIRKAKSQSFRTRRSPSERSSKGGHVSPW 376

  Fly   123 ------PAATATPPQQQQQQQAAPSVLQQHLGHLNYESGATAAAAATAAAAAATVATSR------ 175
                  ...|.|..|.|||||..|......:.||.....:.::|.:...:...|:.:|.      
Mosquito   377 NFSAQLSTGTGTSTQVQQQQQQLPKSPVGSMTHLEQHRSSISSAKSPCLSRQGTLRSSHRRKSSL 441

  Fly   176 SGSATLAQHLATPSNIL--QAAFG---SSNLQHILTRSAPSPSSSAISSNNCSSACAGNTHYNGG 235
            ..|..|:|...:|.::|  ::..|   |.||  ::|..|.:.|....|....|        ::|.
Mosquito   442 GASLNLSQGRRSPISMLNDRSPSGRPKSPNL--LITDQAYASSFDRRSPTAMS--------FSGR 496

  Fly   236 NSNSGSSSSNSNHHSNSIIASRL-FGAASSSSS---------SSSSSASASSSSVAASSSSSSHH 290
            .|.||..|.:....|.|...|.| |...|..|.         |.:|.:|..|:|.|...:|.:.|
Mosquito   497 RSPSGLRSPSGGLRSPSGRRSPLGFNLQSEYSELLQSQQDRFSPNSLSSHQSTSGADRRTSPTIH 561

  Fly   291 LHSHHSALTNSITNRINQSIRRHLNQQQHHHPLSASSSSASASPS--------ASTSSSSSYQ-- 345
            |....|.......:|:..|:         :.|:.:.|.||..||:        ..::.|.:|:  
Mosquito   562 LPPERSRSPVGFGSRLGGSL---------YGPVGSESRSARTSPTTLGTIPPITISNPSETYEIV 617

  Fly   346 QSSVQQQHYNCAHPAQQQQHHHHHHSSSSSSSSSSSSSHHHHNSSSSSNSNNQQQPQQSPLCLVL 410
            |.|::..        ||||.......|..|..|....      ...::|...|..|::.....|:
Mosquito   618 QKSIETN--------QQQQQQQRSPKSPKSPKSPMKP------EPGAANGGGQSAPEKKEKTSVM 668

  Fly   411 -----LVKCPNSKEFCNAAANFCDKRLPVNECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVN 470
                 .|:.|:.|                   ..::|::..:....:.||               
Mosquito   669 KEILAFVRKPSKK-------------------VTTRTSKFAAAFTRTEST--------------- 699

  Fly   471 TPVAENWCYTQVKVVKFSYMWTINNFSFC------REEMGEVLKSSTFSAGANDKLKWCLRVNPK 529
                     |...:::.|...:|.|.|.|      .::|.|:......|:     |||       
Mosquito   700 ---------TGAPLLRQSTFSSIQNSSSCAGRNAITKQMSEIAFEPIMSS-----LKW------- 743

  Fly   530 GLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRR 594
                                 ..|.:|.....|....:........|:                 
Mosquito   744 ---------------------KNVGSKMSLKSLKKLSQGMSVTSDGRS----------------- 770

  Fly   595 DFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTL 659
                        .||.:...|||.|..|...:|.|.|     |..  ||.:..:.::..|..|  
Mosquito   771 ------------RDKRSSGDEVSDVESSDGAAGASGI-----PNA--SEAVFEVLESVHFEKV-- 814

  Fly   660 SVGGREFQAHKAILAARS-----DVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAP 719
               |..:..|..|....|     |..|...:.|.......|:.:|.|..  :|:.|..::|.:.|
Mosquito   815 ---GEAYIKHDQIREEESPRGSQDSAAGSDDDERHGSDSGRLRVTAVSE--IKKSLEALFTRQEP 874

  Fly   720  719
            Mosquito   875  874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 21/143 (15%)
BTB_POZ_roadkill-like 637..757 CDD:349654 19/88 (22%)
BACK_roadkill_like 752..825 CDD:350595
gprsXP_061514418.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.