DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and LOC1277279

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_316728.4 Gene:LOC1277279 / 1277279 VectorBaseID:AGAMI1_005693 Length:387 Species:Anopheles gambiae


Alignment Length:154 Identity:49/154 - (31%)
Similarity:85/154 - (55%) Gaps:15/154 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 DNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIY 714
            ||   :|||..|.|....||:.||||||:.|.|:....::|.|.|.:|: ||..|..|.::::||
Mosquito    27 DN---ADVTFIVKGEHLPAHRNILAARSEYFRALLYGGLKESKQNEIAL-DVPVEAFKFLMKYIY 87

  Fly   715 TGKAPNLEKMAD----DLLAAADKYALEKLKVMCEEALCVNLSVETA---AETLILADLHSADQL 772
            ||:.| |:||.:    |:|..|.:|....|:....:.||.::.::..   :.|..|.||:|   |
Mosquito    88 TGRLP-LKKMKNTDILDILELAHQYGFIDLQTAISDYLCKDICMDNVCYISRTACLLDLNS---L 148

  Fly   773 KAQTIDFINTHATDVMETSGWQNM 796
            ......|::.:|:.|:::..::::
Mosquito   149 STACYTFMDENASSVLKSDMFRSI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 40/110 (36%)
BACK_roadkill_like 752..825 CDD:350595 9/48 (19%)
LOC1277279XP_316728.4 None
Blue background indicates that the domain is not in the aligned region.

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