DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and LOC1277278

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_316727.5 Gene:LOC1277278 / 1277278 VectorBaseID:AGAMI1_005967 Length:370 Species:Anopheles gambiae


Alignment Length:178 Identity:50/178 - (28%)
Similarity:88/178 - (49%) Gaps:16/178 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 SGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEE 690
            |..|.|.|..|    |...|..:..|...:|||..|.|....||:.|||.||:.|.|:....::|
Mosquito     4 SSISEIDQTAV----LVTHLAQICFNADNADVTFIVKGEHLPAHRIILATRSEYFRALLYGGLKE 64

  Fly   691 RKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMAD----DLLAAADKYALEKLKVMCEEALCVN 751
            .|.|.:.: |:..:..|.::::||||:. :|::|.:    |:|..|.:|....|:....:.||..
Mosquito    65 SKQNEITL-DIPAKAFKYLMKYIYTGRL-SLKQMKNTDILDILELAHQYRFVDLQTAISDYLCKV 127

  Fly   752 LSVETA---AETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNM 796
            :.::..   :.|..|.||:|   |......|::.:.::||:...::|:
Mosquito   128 ICMDNVCYISRTACLLDLNS---LSTACYTFMDKNVSNVMKPHIFRNI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 35/123 (28%)
BACK_roadkill_like 752..825 CDD:350595 10/48 (21%)
LOC1277278XP_316727.5 None
Blue background indicates that the domain is not in the aligned region.

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