DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and LOC1275593

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_314856.4 Gene:LOC1275593 / 1275593 VectorBaseID:AGAMI1_001440 Length:392 Species:Anopheles gambiae


Alignment Length:168 Identity:47/168 - (27%)
Similarity:80/168 - (47%) Gaps:22/168 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV 705
            |.|.|..|..|...:|||.:|.|:...||:.|||.||:.|.|:....::|.|.|.:.: .|..:.
Mosquito    12 LVEQLAQLCMNADNADVTFTVKGQHLPAHRIILATRSEYFRALLFGALKESKQNEITL-HVSVDA 75

  Fly   706 LKEMLRFIYTGKAPNLE-KMAD--DLLAAADKYALEKLK---------VMCEEALCVNLSVETAA 758
            .|.::::||||.....: |:.|  |.|..|.:|....|:         |:....:||.|      
Mosquito    76 FKYLMKYIYTGSLSLKQMKIGDILDTLELAHQYGFIDLQKAIANYLGNVIGMNNVCVIL------ 134

  Fly   759 ETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNM 796
            ||..|.||   .:|.:....|::.:|..::::..::.:
Mosquito   135 ETARLLDL---TELSSTCYTFMDENANSIIQSYNFRRI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 39/127 (31%)
BACK_roadkill_like 752..825 CDD:350595 9/45 (20%)
LOC1275593XP_314856.4 None
Blue background indicates that the domain is not in the aligned region.

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