DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpoz2l8

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_038959864.1 Gene:Tdpoz2l8 / 102553503 RGDID:7711567 Length:364 Species:Rattus norvegicus


Alignment Length:352 Identity:181/352 - (51%)
Similarity:240/352 - (68%) Gaps:2/352 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 YTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYL 543
            ||.:.|.||.|.|||:|||||.:.:.|::.|..||..||::::|||.:.|.|:|||||||||:.|
  Rat    12 YTHISVQKFCYKWTISNFSFCMDGIWEIITSPVFSLEANEEVQWCLTLYPNGVDEESKDYLSVCL 76

  Fly   544 LLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPED 608
            .|.||.||.|.|||:..|:||:.|:.:..|.....||:..:.|..:|||.|||||...:.|||||
  Rat    77 GLHSCPKSPVLAKFQCWIINAQGEKHQITEIPNVIRFLPNEQWALRKFILRDFLLSHRHWLLPED 141

  Fly   609 KLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAIL 673
            :|.:.|:||:|..|.:..|.:.....|.|...|:.|:|.|::|..|:|.||.|.|:||:||||||
  Rat   142 QLILCCKVSIVGPSFSRPGHNMRPAIKDPTQMLANDIGELWENSLFTDCTLVVDGQEFRAHKAIL 206

  Fly   674 AARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAAADKYA 736
            ||||.||.|||||||:||..||:.|.|:..:|.|||:.||||||||:|  ..||..|||.||||.
  Rat   207 AARSPVFRAMFEHEMQERLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATGLLATADKYD 271

  Fly   737 LEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHS 801
            |:.|||:||::||.||||:.|..|||||||||.:.||.:.:|||..||::|.||..|::|:.:|.
  Rat   272 LQDLKVICEDSLCRNLSVKNAVTTLILADLHSTEHLKTKAMDFIILHASEVSETLEWKSMVGSHP 336

  Fly   802 HLIAEAFRALATQQIPPIGPPRKRVKM 828
            ||:.||||.||:.....:.|..||.|:
  Rat   337 HLVEEAFRTLASVHCFSLEPSLKRQKI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 68/137 (50%)
BTB_POZ_roadkill-like 637..757 CDD:349654 73/121 (60%)
BACK_roadkill_like 752..825 CDD:350595 35/72 (49%)
Tdpoz2l8XP_038959864.1 MATH 16..153 CDD:445786 67/136 (49%)
BTB_POZ 165..292 CDD:453885 74/126 (59%)
BACK 287..351 CDD:475122 34/63 (54%)

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