DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and kbtbd2

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_002937037.1 Gene:kbtbd2 / 100380094 XenbaseID:XB-GENE-1012666 Length:622 Species:Xenopus tropicalis


Alignment Length:174 Identity:47/174 - (27%)
Similarity:76/174 - (43%) Gaps:15/174 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV 705
            |.|.|...::.:..:|:.|.|.|.||..||.:||..|..|.|||...:.|.|...|.:.:||...
 Frog    17 LLEQLKLFYEQQLLTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAAS 81

  Fly   706 LKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSAD 770
            |:.::.:.|||.....|...:.|...|....::.:..:|.|.|...::.:.....|..|||.|.:
 Frog    82 LQIIITYAYTGNLAINESTVEQLYETACFLQVDDVLQLCREYLIKKINAKNCVRLLSFADLFSCE 146

  Fly   771 QLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFRALATQ 814
            :||......:             ::..||..|  .|||..|:::
 Frog   147 ELKQSAKRMV-------------EHKFTTVYH--QEAFMQLSSE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 33/115 (29%)
BACK_roadkill_like 752..825 CDD:350595 14/63 (22%)
kbtbd2XP_002937037.1 BTB_POZ_KBTBD2_BKLHD1 5..137 CDD:349579 33/119 (28%)
PHA03098 23..510 CDD:222983 44/168 (26%)
BACK_KBTBD2 128..223 CDD:350554 14/63 (22%)
KELCH repeat 309..365 CDD:276965
KELCH repeat 369..415 CDD:276965
KELCH repeat 418..452 CDD:276965
KELCH repeat 458..515 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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