DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and klhl41a

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001410756.1 Gene:klhl41a / 100148315 ZFINID:ZDB-GENE-081105-22 Length:599 Species:Danio rerio


Alignment Length:146 Identity:36/146 - (24%)
Similarity:65/146 - (44%) Gaps:3/146 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMF--EHEMEERKLNR-VAITDVD 702
            |.:.|..|....||.|..|.||.|....|:.|:||.|..|..::  |...|::..|: |.:.:||
Zfish    18 LQDGLKELLKENKFVDCILKVGDRSLPCHRLIMAACSPYFRELYFTEDGTEKKDANKEVVLENVD 82

  Fly   703 HEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLH 767
            ..::..::.::|:......:....|:.|.|:|:.:..:..:|...|...||:........:..:.
Zfish    83 PNIMDMIVNYLYSADIDITDDNVQDVFAVANKFQIPSVFTVCVNYLQNKLSLGNCLAIFRMGLVL 147

  Fly   768 SADQLKAQTIDFINTH 783
            :..:|.....|||..|
Zfish   148 NCPRLAVSARDFIAEH 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 31/118 (26%)
BACK_roadkill_like 752..825 CDD:350595 7/32 (22%)
klhl41aNP_001410756.1 BTB_POZ 6..140 CDD:453885 31/121 (26%)
PHA03098 46..521 CDD:222983 26/118 (22%)
BACK_KLHL40_like 132..230 CDD:350552 7/32 (22%)
KELCH repeat 328..377 CDD:276965
Kelch 1. /evidence=ECO:0000255 339..391
Kelch 2. /evidence=ECO:0000255 393..440
KELCH repeat 431..474 CDD:276965
Kelch 3. /evidence=ECO:0000255 441..488
NanM 466..>594 CDD:442289
KELCH repeat 478..522 CDD:276965
Kelch 4. /evidence=ECO:0000255 489..535
KELCH repeat 525..578 CDD:276965
Kelch 5. /evidence=ECO:0000255 537..591
Blue background indicates that the domain is not in the aligned region.

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