DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc2 and ORC2

DIOPT Version :10

Sequence 1:NP_731873.1 Gene:Orc2 / 41703 FlyBaseID:FBgn0015270 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_181292.1 Gene:ORC2 / 818332 AraportID:AT2G37560 Length:363 Species:Arabidopsis thaliana


Alignment Length:650 Identity:162/650 - (24%)
Similarity:275/650 - (42%) Gaps:106/650 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MSIENLTNSEEESEDLNTAMVGNAVESQPKVTSR-------RSTRRPSPTKKYQAYQKESNGKGQ 75
            ::| |. ...| ||. |....|.:.. . .:| |       .|.....|. . .|... ..|..:
plant   253 ITIONCOMPLEXSECONDLARGESTSUBUNITORCCONTAINSINTERPRODOMAINSORIGINR 317

  Fly    76 E--ERIVVNYVEMSDERSSDAEDQEEEESIEESENAARPA-----AKDL---HLIQSEYNVAGTS 130
            |  ..|.: .. |..| | :          ..:.|..||.     |.:|   |:..:   .. |.
plant   318 ECOGNITIONCOMPLEXSUB---------UNITINTERPROIPRHASBLASTHITST--OPROTE 371

  Fly   131 MFGFNTPKKRDAMALAALNATPCTPKTPKTPRLGVKTPDTKRKKSMDQPKT----PAHVRTRVKK 191
            :...|:|:        .:.:..|..:...|.|:.::|.: .. ..:....|     :.. |..::
plant   372 INSINSPE--------CIESARCHAEBACTERIAMETAZOAFUNGIPLANTSVIRUSESOTHERE 428

  Fly   192 QIAKIVADSDEDFSG-------DESDFRPSDEESSSSSSSSDAGNSSDNDAADDEPKTPSRARRA 249
             .|:. .:|.  ...       ::.: |...... .:::..: ....:|:..|:      |...|
plant   429 UKARYOTESSOURCENCBIBLINKDBXREFARAPORTATGDBXREFGENEIDDB-----XREFTA 488

  Fly   250 IVVPVLPKTPSAARLRQSARAKKSNEFVPESD-GYFHSHASSKIL--TSDHTLDRLKNPRLAADR 311
            |                .|...:..|.:.|.: |:..::..:|.|  .|..:..:|.:..:..::
plant   489 I----------------RATGMEDIENIEEDEYGFSRNYFLAKELGGASKRSAHKLSDIHIVDEQ 537

  Fly   312 VFSLLSEIKTSA-----EHEGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHRE 371
                  |::.:|     :|...|:.:|.:|::.:.||:..|..||.:|:||.|||..|::.|...
plant   538 ------ELRETASTIEMKHSKEISELMSDYKTMYSKWVFELRCGFGLLMYGFGSKKALVEDFASA 596

  Fly   372 VLHKQTVLVVNGFFPSLTIKDM---LDSITSDIL------DAGISPAN---PHEAVDMIEEEFAL 424
            .|...:|:|:||:.||:.:|.:   |..:.|::|      ...:|...   |..::|.| ..|..
plant   597 SLTDYSVVVINGYLPSVNLKQVLLALAELLSELLKCKRKSSGSLSKGQETFPSRSMDDI-LSFLH 660

  Fly   425 IPET-----HLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLC--S 482
            .|::     .:.::|||:||..||:.::|..|:||:...:|.|:|||||:|.|||||: |:.  .
plant   661 GPQSGDKDCFICVVVHNIDGPALRDPESQQTLARLSSCSHIRLVASIDHVNAPLLWDK-KMVHKQ 724

  Fly   483 FNFSWWDCTTMLPYTNETAFENSLLVQNSGELALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGN 547
            ||:.|....|..||..|..|...:|.|.|......:...|..|||.|.:.::.::.:|||.:...
plant   725 FNWLWHHVPTFAPYNVEGVFFPLVLAQGSTAQTAKTAAIVLQSLTPNGQNVFKILAEYQLSHPDE 789

  Fly   548 ATYQGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSVDGSEQLTIPIDGALLQQFL 612
               .|||..||||:.||.|.|||.:.|.:.||||.||:|||:||:.||.|.|.||:....::|.|
plant   790 ---DGMPTDDLYSASRERFFVSSQVTLNSHLTEFKDHELVKTKRNSDGQECLNIPLTSDAIRQLL 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc2NP_731873.1 PTZ00449 <136..310 CDD:185628 23/187 (12%)
ORC2 296..604 CDD:461163 112/331 (34%)
ORC2NP_181292.1 ORC2 33..353 CDD:461163 21/108 (19%)

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