DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc2 and orc-2

DIOPT Version :9

Sequence 1:NP_731873.1 Gene:Orc2 / 41703 FlyBaseID:FBgn0015270 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_496339.1 Gene:orc-2 / 174676 WormBaseID:WBGene00003882 Length:430 Species:Caenorhabditis elegans


Alignment Length:460 Identity:119/460 - (25%)
Similarity:203/460 - (44%) Gaps:49/460 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 MDQPKTPAHVRTRVKKQIAKIVADSDEDFSGDESDFRPSDEESSSSSSSSDAGNSSDNDAADDEP 240
            |.:||...  |..|:...|..|..|..:..|.... :.:.:|::|.:..|:.....:....:|| 
 Worm     1 MPRPKILK--RATVQPSAAVPVKKSTPEKEGSRQK-KTNGKENASRNLQSNLEEDLEQLGFEDE- 61

  Fly   241 KTPSRARRAIVVPVLPKTPSAARL-----RQSARAKKSN-EFVPESDGYFHSHASSKILTSDHTL 299
             |.|.|:.||....:....::.|:     |:..||...| |.:.|.|..  |:|.:.....|  |
 Worm    62 -TVSMAQSAIENYFMQGKSASERMNNAKSRRGRRAGNGNTEEIEEDDEI--SNAITDFTKCD--L 121

  Fly   300 DRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQL 364
            ..|:|.....|.     :|.:...||...         :.|.||...|..||||||:|:|||..:
 Worm   122 PGLRNYITKKDN-----TEFEKRLEHLAD---------NDFGKWKLYLAAGFNILLHGVGSKRDV 172

  Fly   365 LQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDI-LDAGISPANPHEAVDMIEEEFALIPET 428
            |..|..| |...|.:.|:.....|.:|.:|.:|..:: |:..:.  .....:.........:...
 Worm   173 LTEFENE-LSDYTYMRVDARKDGLNVKVLLGAINENMKLNCNVK--RGQSTISWARSIRRKMNSQ 234

  Fly   429 HLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTM 493
            .|.||:.|::....|: ..:|....|....::.|:|::|||.:..:|:..:|.|.:|......|.
 Worm   235 QLILIIDNIEAPDWRS-DQEAFCELLENRDSVKLIATVDHIYSTFIWNSRQLSSLSFVHITINTF 298

  Fly   494 -LPYTNETAFENSLL----VQNSGELALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATYQGM 553
             :|.......::.||    ..|.....:||:...:.||..||:.::.|..:.....|     :.:
 Worm   299 EIPLQELMTGDSRLLGLDARSNQSSHTMSSLDVFWKSLAVNSQKLFRLFFQMYFDTK-----KPV 358

  Fly   554 PFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSVDGSEQLTIPIDGALLQQFLEEQ--- 615
            .|.||:::.::.|:.|:|.|||.||.||.||:::|..|..||::||:..::..|:.:|||.:   
 Worm   359 KFWDLFNAAKDDFIASTDAALRTQLVEFKDHRVLKWTRGDDGNDQLSGIVELRLVTEFLESKNMP 423

  Fly   616 --EKK 618
              |||
 Worm   424 LDEKK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc2NP_731873.1 ORC2 160..614 CDD:227862 115/449 (26%)
ORC2 296..604 CDD:282004 83/313 (27%)
orc-2NP_496339.1 ORC2 138..405 CDD:282004 76/284 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158974
Domainoid 1 1.000 102 1.000 Domainoid score I4306
eggNOG 1 0.900 - - E1_COG5575
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3336
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1404162at2759
OrthoFinder 1 1.000 - - FOG0004739
OrthoInspector 1 1.000 - - oto17812
orthoMCL 1 0.900 - - OOG6_102887
Panther 1 1.100 - - LDO PTHR14052
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R871
SonicParanoid 1 1.000 - - X3334
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.730

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