DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9925 and tdrd6

DIOPT Version :9

Sequence 1:NP_650324.1 Gene:CG9925 / 41702 FlyBaseID:FBgn0038191 Length:892 Species:Drosophila melanogaster
Sequence 2:XP_031758870.1 Gene:tdrd6 / 105948404 XenbaseID:XB-GENE-5969988 Length:2499 Species:Xenopus tropicalis


Alignment Length:1129 Identity:208/1129 - (18%)
Similarity:347/1129 - (30%) Gaps:427/1129 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KSEEKTCVVCGTPTRLMCQRCGEPYCNEKCQKLDWQRHRQV---CIIMPPLVECRPLQPALNPIQ 64
            |:.:|. |||...     :...|||...:.|..:.....:|   |||.|.|..|:      |.:.
 Frog   713 KARQKE-VVCSVQ-----ENKSEPYSPFEDQFFEPGTTIEVVVSCIINPSLFWCQ------NALH 765

  Fly    65 SVENQVALAKTR----------TKSPIPCVEPTVAVPNKPDLSENWRKHLLPSGMEFFKCRVTFM 119
            |.:.:..:||.:          .:....|:.       |......|.:              .|:
 Frog   766 SAKLEKLMAKIQDICLNAGCSYERGACACLA-------KSSCDGRWYR--------------AFI 809

  Fly   120 ENDGPIWVVHVANVEAI-----ERMTVNMQ--RCMQNK--------------KMIRMEGVRE--- 160
            .|:.|.......:||.:     .|.||:::  |||:::              .:|..:|...   
 Frog   810 VNEMPAGKASSDHVEVLFVDYGIRETVSLKDLRCMESELFGLKAQAFKCSLYNIIAPDGENPFEW 874

  Fly   161 DTLVAISVG---DKVHRGHVLTVCQ-------KKQEANVRMIDHGQIVATPFRDIYTIVPKMAES 215
            |.:..:|..   |...:......|.       ||:..||  :|    |.|||..|..::.:...:
 Frog   875 DAITTLSFNRFVDSFSKKTTEFKCTFFATASFKKELFNV--VD----VFTPFASICKLLVEQGHA 933

  Fly   216 KAFAFR-----VQLPT---------------------------------NTGVQD-IKNLTLRML 241
            |..:.|     |||.|                                 ||...| |.:.|.|:.
 Frog   934 KQLSHRTLVPSVQLQTYYYSTHDIKIGGEEEVYITYVNSSLEFYCQLSRNTETMDMIASATTRVC 998

  Fly   242 G--------------TKTSDGAYH---------------------------------------VH 253
            .              .|.||..::                                       :|
 Frog   999 NEVKKFQLSPGSLCLAKFSDQQWYRCFTNFNKNSTDVFFVDYGNTEKLTKEELLPIPSDAYELLH 1063

  Fly   254 LKPKMI------IPLSLPLEML----------------------------------QLNPEVKVI 278
            ...:.|      ||.::|.|::                                  |:|..:|. 
 Frog  1064 FPMQAIKCSLSDIPDTIPREVVLWFENLILDKPLKALIVAKETDGKLIVELYDGSQQINSSIKA- 1127

  Fly   279 RVFKANP-------------------KHNEPQLALLQINVMGHVNADLNN--------------- 309
            ::...||                   |...|..|....|.....::||:|               
 Frog  1128 KLGLKNPRTEGYFGNAEKRHQLNDLDKGGRPDSAFKLYNQGSKFSSDLDNHSQNGFTHQKSASFV 1192

  Fly   310 -----RIAEKPRQPFTLPFPEQKSIFFAATR-TKNGY------------RRAFLLDHIMKPRPTY 356
                 :..:||....:.|:.:.:.::..... :::||            |.|      ::.||..
 Frog  1193 AKERDQFEQKPNLRTSRPYIQDREVYSVRKNISQSGYAPHKTGEFRSKDREA------LEQRPNL 1251

  Fly   357 LVYEM-DEGR-VSIATDLSRI---PSELLGLPSR------------VFAAQLEDSVPEELETQGA 404
            ....| .:|| ||::.:.|..   |.:..|..|:            .|....::|........|:
 Frog  1252 KTSGMYSQGREVSMSQNGSNSGFPPKKTGGFRSKEREVSEHKQNPDAFKGYNQESKMSPQLRNGS 1316

  Fly   405 ELTVKFKLDNKPPKEKLRAANAALNSKGE-QICMARLITFLGQISYL-------GHKYWREPIVH 461
            ::...:..::....|.....||:...:.. |.|  :.|..|.::|.|       |.|        
 Frog  1317 QMEASWSSESDRSSEHKPEINASQQRRSTFQEC--KSIPPLTKLSDLPKQNITPGFK-------- 1371

  Fly   462 DSIVFISHLVSFKEVYISTPDAKQYAEIFKRL--EYKCATITKSSDVSVGSIVLVVSKQMG-HFR 523
             |.|:|||..:..:.|:......:.:.|.:.|  |.|.:......||::|.::....:..| ::|
 Frog  1372 -SSVYISHTNTLSDFYVQIAQDTELSNISEILNNEKKPSDRLDEKDVNLGDLICAFFEDDGLYYR 1435

  Fly   524 GEILSKDSGLFEVMNVDTGATQKVELAEIRSSCRFLENLPV----CLMRVQLQNVC--NIPDAAV 582
            ..|..|.|...:|..:|.|.|..:..::|......|.:.||    |.:.......|  |:.|..|
 Frog  1436 AVITEKHSDGLQVQYIDYGNTLTIPASQIYKLPPSLSSAPVMSIFCALDKCTTAACEQNMDDLMV 1500

  Fly   583 PVNNAAIQMLHKLC--AQKELLKLNMV--DATTSTVDLLFSSGDSRSLTTQMLPLIFTPVQEKAE 643
            ..:..... |...|  .|...||.|::  |......||..|:.|         ||:..|..|:.:
 Frog  1501 KFSERTGD-LELSCEFVQCNNLKWNVILCDDQGCINDLFISASD---------PLLNPPSLEEPD 1555

  Fly   644 VAPPKAASTPSQLPVVTHKQQKVSPQSLLLLDLPPLP------PSPPESP-------FPADVTST 695
            |       |..||..|:|          .:.:||.|.      .|..:||       ..|||   
 Frog  1556 V-------TSEQLNGVSH----------YVWNLPALGERVEAYASAVDSPEHFWCQLVTADV--- 1600

  Fly   696 KSASHVLPIKRFLFDALPKNLAPLGDKVNLILMNADGLPQTGYITAAYFKDEKAAKEFEKILSLT 760
                          |:|...:...|::                    ...|.|.:.|.|      
 Frog  1601 --------------DSLAVKVQEAGER--------------------SVHDGKFSTEIE------ 1625

  Fly   761 SSQGACDHNVVPGYVPNVGELCLAIYSEDKNWYRGVCQEVKDNMVKILFCDFGNTEYVAVRHVKP 825
                             ||..|..|||||.:|||....:::.:.|.:.|.|:||.|.:.:..|:.
 Frog  1626 -----------------VGSPCNVIYSEDNHWYRAAVTKIEADQVTVRFVDYGNEEMLHLEQVRR 1673

  Fly   826 ISQDL-LIAVNVTKCYINGFDKSK 848
            :..|| .|......|.:.||:.|:
 Frog  1674 LPADLATIPAQAFSCSLAGFNLSE 1697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9925NP_650324.1 zf-MYND 9..44 CDD:280009 8/37 (22%)
TUDOR 109..225 CDD:278965 31/154 (20%)
TUDOR 457..573 CDD:278965 27/122 (22%)
TUDOR 718..843 CDD:278965 27/125 (22%)
TUDOR 779..825 CDD:119391 17/45 (38%)
tdrd6XP_031758870.1 Tudor_SF 24..153 CDD:413384
Tudor_TDRD6_rpt2 258..389 CDD:410492
Tudor_SF 497..630 CDD:413384
Tudor_SF 734..863 CDD:413384 26/155 (17%)
Tudor_SF 950..1073 CDD:413384 11/122 (9%)
Tudor_SF 1371..1483 CDD:413384 28/120 (23%)
Tudor_SF 1578..1717 CDD:413384 38/180 (21%)
MDN1 <1950..2492 CDD:227596
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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