DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9925 and Tdrd15

DIOPT Version :9

Sequence 1:NP_650324.1 Gene:CG9925 / 41702 FlyBaseID:FBgn0038191 Length:892 Species:Drosophila melanogaster
Sequence 2:XP_006239938.1 Gene:Tdrd15 / 102556253 RGDID:7716193 Length:2015 Species:Rattus norvegicus


Alignment Length:1039 Identity:193/1039 - (18%)
Similarity:303/1039 - (29%) Gaps:427/1039 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 DGPIWVVHVANVEAIERMTV------NMQRCMQNKKMIRME-----------GVREDTLVAISVG 169
            |..:.|:|   :|.:.:..:      |...|..:..:::.|           |:.|..||....|
  Rat    12 DADLTVLH---IECLPKDILVKFQGKNNSECQFDYHILQREIQYIPKVANNLGIDEFCLVEERTG 73

  Fly   170 DKVHRGHVLTVCQKKQEA-NVRMIDHGQ-------IVATPFRDIYTIVPKMAESKAFAFRVQLPT 226
            : ..||.||   .||.|. .|.:||.|.       .||:.::.|:.:.|::...   .|...|| 
  Rat    74 E-WQRGRVL---GKKNEVYTVLLIDRGDELTVDSTRVASAYKKIFELPPRVIFG---IFANILP- 130

  Fly   227 NTGVQDIKNLTLRMLGTKTSDGAYH-------VHLKPKMIIPLSLPLEMLQLNPEVKVIRVFKAN 284
                          :|.|.|..|.:       :.||..|  ...|||:|:.|... |||.     
  Rat   131 --------------VGEKWSPKALNYFRSLVGIQLKGNM--QTILPLQMILLEAP-KVIS----- 173

  Fly   285 PKHNEPQLALLQINVMGHVNADLNNRIAEKPRQPFTLPFPE---QKSIFFAATRTKNGYRRAFLL 346
                    .:|::.:...|:.|....|.|..:: ...|.|:   .|.....:..........::|
  Rat   174 --------GVLELQLGRFVDRDTFRLIVETLKE-IPQPMPDLLRHKRPVLQSRSKSTSLDMQYVL 229

  Fly   347 DHIMKPRPTYLVYEMDEGRVSIATDLSRIPSELLGLPSRVFAAQLEDSVPEELETQGAELTVKFK 411
            |:.   :|:..|..:|..:||.|..           ||: |..||...:| |||    :||.:..
  Rat   230 DNF---QPSLPVGSLDSIKVSSALS-----------PSK-FYCQLLKQIP-ELE----DLTERMN 274

  Fly   412 L-------DNKPPKEKLRAANAALNSKGE-QICMARLITFLGQISYLGHKYW--------REPIV 460
            |       :|.|..|.......|..:.|. |..:.:.:....|:     |.|        ..|.|
  Rat   275 LHYDTGDQENSPACENFGLLCVAKGTNGRWQRGILQQVLPDNQV-----KIWFMDYGGSESVPSV 334

  Fly   461 H-----DSIVFISHLVSF--KEVYISTPD---AKQYAEIFK-------------------RLEY- 495
            |     ...|| :.|.||  ...|:.:||   .||...:||                   ||.| 
  Rat   335 HVKKLKQDFVF-APLFSFPCSLTYLHSPDQEVRKQQLTVFKQALLGHVVSACIDCFSEDERLYYV 398

  Fly   496 -----------KCATITKSS---------DVS--------------------------------- 507
                       ||...|:|:         |:|                                 
  Rat   399 TLQPQESAAHAKCLQRTRSTQIHCPAFEPDISKALDDAGTYRTDSFVVDVQQPAGGLNKEDDLRA 463

  Fly   508 ---------------VGSIVLVV------------------------------------------ 515
                           :..:|.|:                                          
  Rat   464 AFAIKTVKMEIESTYIAFVVNVLNPSNFWVRINKYQNKFQDLMRTINMFYNKPENDELTLRHPGP 528

  Fly   516 --------SKQMGHFRGEILSKDSGLFEVMNVDTGATQKVELAEIRSSCRFLENLPVCLMRVQLQ 572
                    ||....:|..|...|.....|..:|.|:|..:.|.:               .::.|.
  Rat   529 GLFCCARYSKDRCFYRAIITEVDDYRINVYLLDYGSTHSISLFD---------------AKILLP 578

  Fly   573 NVCNIPDAAV--------PVN----NAAIQMLHKLCAQKELL-------------KLNMVDA--T 610
            ..|.:|..||        ||.    .||.....|:...|.:|             .:..|:|  .
  Rat   579 EFCELPPLAVHCSLAYIAPVTKVWIKAATDYFKKIVLNKAILLQVIRKRDDKYMVNIQNVEAPEN 643

  Fly   611 TSTVDLLFSSGDSRSLTTQMLPLIFTPVQEKAEVAPPKAASTPSQLPVVTHKQQKVSPQSLLLLD 675
            |..|.|:..:|.:                        |.|..||.   ..||    |.:..|:|.
  Rat   644 TDAVSLMLQAGHA------------------------KPAEVPSS---GFHK----SVRDRLVLK 677

  Fly   676 LPPLPPS------PPESPFPADVTSTKSASHVLPIKRFLFDALPKNLAPLGDKVNLILMNADGLP 734
            |..|...      |.:.|.|....|.|...::..:.|||         .|....||:........
  Rat   678 LNTLHEKSVVTSVPVKRPEPERYHSNKLKGNISSLCRFL---------DLKVSFNLVFEPNPSQS 733

  Fly   735 QTGYITAAYFKDEKAAK----------EFE-------KILSLTSSQGACDHNVVPGYVPNVGELC 782
            ...|:    ||..|..:          :|.       :.|.|...|....:::.|.........|
  Rat   734 YKEYV----FKPGKLLEVNCSYCHGPGDFSCQLQCKLEDLKLLMEQIQAYYSIHPEPYQTGKVAC 794

  Fly   783 LAIYSEDKNWYR-GVCQEVKDNMVKILFCDFGNTEYVAVRH-----------------------V 823
            :|.:|.|..||| .:..:..:..|:::|.|:||.|.|.::.                       |
  Rat   795 VAKHSRDGKWYRAAILTQASEQEVELIFVDYGNQERVFIKDLCAINPHFLALEAQAFRCCLNYLV 859

  Fly   824 KPISQDLL---------------------------IAVNVTKCYINGFDKSKNFAALEQFLVRK 860
            :||:..||                           :.:...:|..|..|....|.:..:||:|:
  Rat   860 EPITYKLLDWTAEASRDFGNFISSCGGLLTCIVYALVLIHPRCLCNLVDLQSPFTSANEFLLRR 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9925NP_650324.1 zf-MYND 9..44 CDD:280009
TUDOR 109..225 CDD:278965 28/127 (22%)
TUDOR 457..573 CDD:278965 37/263 (14%)
TUDOR 718..843 CDD:278965 32/192 (17%)
TUDOR 779..825 CDD:119391 15/69 (22%)
Tdrd15XP_006239938.1 Tudor_TDRD15_rpt1 14..159 CDD:410507 36/171 (21%)
Tudor_TDRD15_rpt2 238..356 CDD:410508 34/140 (24%)
Tudor_SF 472..612 CDD:413384 21/154 (14%)
Tudor_SF 734..858 CDD:413384 23/127 (18%)
Tudor_SF 949..1072 CDD:413384
Tudor_SF 1295..1399 CDD:413384
Tudor_SF 1660..1795 CDD:413384
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.