DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and hdgfl2

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001002037.2 Gene:hdgfl2 / 80965 ZFINID:ZDB-GENE-040426-2104 Length:662 Species:Danio rerio


Alignment Length:225 Identity:54/225 - (24%)
Similarity:84/225 - (37%) Gaps:76/225 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MP-NFTIGDFVFAKLRRYRPWPGRI-----------LNRIGATAYSVYFYGSCNYAKVARKEVVD 60
            || ||..||.||||::.|..||.||           .|:|     .::|:|:...|.:|.|::..
Zfish     1 MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKI-----PIFFFGTHETAFLAPKDLFA 60

  Fly    61 YEKNLHRLGVVQQKGHVCNPSFRASMLQAR-EAFDNPDKDYGYYQQLAVNNGDCINAEDLGLEYL 124
            ||||..|.|         .|:.|....:.. |..:||...|        |.....::.|      
Zfish    61 YEKNQERFG---------KPNKRKGFNEGLWEIQNNPHASY--------NTPAAASSSD------ 102

  Fly   125 VTEDLGNLLDEQAATEQVVAEKDVNEQVAVEQNVELNSLGQIFSNQEHEK--------------- 174
             :||     ::.||...  ||::  |:..|.:..|..|......:::.:|               
Zfish   103 -SED-----NQPAAASD--AEEE--EEAVVPRKAETGSDDSDSGSEDQKKPAVKRKAPAPKRPPV 157

  Fly   175 ----------DSEDSASNCQLEEKDQSNSE 194
                      |.|:|.|..:.|....|:|:
Zfish   158 KKARASSSDRDGEESGSPSEPEPSPSSDSD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 27/91 (30%)
hdgfl2NP_001002037.2 PWWP_HDGFL2 5..88 CDD:438977 28/96 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..484 23/128 (18%)
LEDGF 479..578 CDD:463284
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 561..662
Blue background indicates that the domain is not in the aligned region.

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