DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and hdgfl2

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_031753048.1 Gene:hdgfl2 / 394783 XenbaseID:XB-GENE-6456056 Length:678 Species:Xenopus tropicalis


Alignment Length:276 Identity:69/276 - (25%)
Similarity:109/276 - (39%) Gaps:60/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RRAKMP-NFTIGDFVFAKLRRYRPWPGRILN-RIGA-----TAYSVYFYGSCNYAKVARKEVVDY 61
            |...|| ||..||.||||::.|..||.||.: :.||     ..|.::|||:...|.:|.|::..|
 Frog    33 RTVTMPLNFKPGDLVFAKMKGYPHWPARIDDVKDGAVKPPPNKYPIFFYGTHETAFLAPKDLFPY 97

  Fly    62 EKNLHRLGVV-QQKGH-------VCNPSFRASMLQAREAFDNPDKDYGYYQQLAVNNGDCINAED 118
            ||...:.|.. ::||.       ..||....|:..|  :..:.|.|....:..|.::|:  ..::
 Frog    98 EKCKDKYGKPNKRKGFNEGLWEIQNNPQASYSLPPA--SVSSSDSDVPEEKSTARSDGE--EEQE 158

  Fly   119 LGLEYLVTEDLGNLLDEQAATEQVVAEKDVNEQVAVEQNVELNSLGQ----IFSNQEHEKDSE-- 177
            .|...|.|..:.: .||:.:.:..|..|.........:..:.:|..|    ..|::|...||:  
 Frog   159 TGQAILPTAGVSS-SDEEGSDKGGVKRKGRTTTPPSAKRTKHSSSEQEPDSASSSEEENSDSDQD 222

  Fly   178 ---------------------------DSASNCQLEEKDQSNSEVVKEQVSERHYSMAQIVSLKS 215
                                       ||.|:   |.:|:...|..|:..|.   |.|...||.|
 Frog   223 FTPEKSTPRIQRRTTNLGKKNKIFAESDSKSD---ESEDEKKEEEQKKSPSS---SSASSPSLSS 281

  Fly   216 KKLMDTPINMTCQRRR 231
            .. .:.|:..|.:.||
 Frog   282 SD-SEAPVKKTPRGRR 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 30/93 (32%)
hdgfl2XP_031753048.1 PWWP_HDGFL2 41..124 CDD:438977 27/82 (33%)
LEDGF 500..585 CDD:463284
Blue background indicates that the domain is not in the aligned region.

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