DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and Glyr1

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001007801.1 Gene:Glyr1 / 360477 RGDID:1309459 Length:552 Species:Rattus norvegicus


Alignment Length:237 Identity:45/237 - (18%)
Similarity:85/237 - (35%) Gaps:74/237 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IGDFVFAKLRRYRPWPGRILN-------RIGATAYSVYFYGSCNYAKVARKEVVDYEKNLHRLGV 70
            :||.|:.||.||.||||:|:|       ..|...:.|.|:|:.::|.:..:::..|  :.|:   
  Rat     8 LGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPY--HAHK--- 67

  Fly    71 VQQKGHVCNPSFRASMLQAREAFDNPDKDYGYYQQLAVNNG----DCINAEDLGLEYLVTEDLGN 131
                                            .:.:.:|.|    ..::|        |.|.|..
  Rat    68 --------------------------------EEMIKINKGKRFQQAVDA--------VEEFLRR 92

  Fly   132 LLDEQAATEQVVAEKDVNEQVAVEQNVELN----------SLGQIFSNQEHEK-----DSEDSAS 181
            ...:...:....|: |.|.:.:.|:....|          |.|::..|....|     .|.|..|
  Rat    93 AKGKDQTSSHTSAD-DKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVTSGSADRGS 156

  Fly   182 NCQLEEKDQSNSEVVKEQVSERHYSMAQIVSLKSKKLMDTPI 223
            .|....::||..:..:....|:..::.:..::|.  :|..|:
  Rat   157 KCLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKG--MMAGPM 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 20/86 (23%)
Glyr1NP_001007801.1 PWWP_GLYR1 6..90 CDD:438961 25/126 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..187 16/96 (17%)
Rossmann-fold NAD(P)(+)-binding proteins <209..>301 CDD:473865
Interaction with histone H3. /evidence=ECO:0000250|UniProtKB:Q49A26 213..216
Interaction with KDM1B. /evidence=ECO:0000250|UniProtKB:Q49A26 215..224
Dehydrogenase domain. /evidence=ECO:0000250|UniProtKB:Q49A26 260..552
MmsB 267..550 CDD:441687
Blue background indicates that the domain is not in the aligned region.

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