DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and Hdgfl1

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_598233.2 Gene:Hdgfl1 / 171074 RGDID:621012 Length:304 Species:Rattus norvegicus


Alignment Length:201 Identity:45/201 - (22%)
Similarity:76/201 - (37%) Gaps:53/201 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PNFTIGDFVFAKLRRYRPWPGRILNRIGATAYSVYFYGSCNYAKVARKEVVDYEKNLHRLGVVQQ 73
            |.:..||.|||||:.|..||.||.:......|.|:|:|:...|.:..|.:..||           
  Rat     7 PKYKTGDLVFAKLKGYAHWPARIEHVTEPNRYQVFFFGTHETALLGPKHLFPYE----------- 60

  Fly    74 KGHVCNPSFRASMLQAREAFDNPDKDYGYYQQL-------AVNNGDCINAEDLGLEYLVTEDLGN 131
                          :::|.|..|:|..|:.:.|       .|....|:..::   |.|..|:.| 
  Rat    61 --------------ESKERFGKPNKRRGFSEGLWEIEHDPMVEASPCLCPDE---EQLCAEEPG- 107

  Fly   132 LLDEQAATEQVVAEKDVNEQVAVEQNVELNSLGQIFSNQEHEKDSEDSASNCQLEEKDQSNSEVV 196
                      ...|.:..:::..|...||.|:.::.:....||:       |:.|.:.:...|..
  Rat   108 ----------PGEEPEPGQELEPESRPELESMPELEAEPRPEKE-------CEQEPEQEPEQEPE 155

  Fly   197 KEQVSE 202
            :|...|
  Rat   156 QELEQE 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 21/79 (27%)
Hdgfl1NP_598233.2 PWWP_HRP 9..85 CDD:438959 26/100 (26%)

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