DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and Hdgf

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_446159.1 Gene:Hdgf / 114499 RGDID:70961 Length:237 Species:Rattus norvegicus


Alignment Length:244 Identity:50/244 - (20%)
Similarity:99/244 - (40%) Gaps:49/244 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RRAKMPNFTIGDFVFAKLRRYRPWPGRI------LNRIGATAYSVYFYGSCNYAKVARKEVVDYE 62
            |..:...:..||.||||::.|..||.||      ..:..|..|.|:|:|:...|.:..|::..||
  Rat     3 RSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYE 67

  Fly    63 KNLHRLGVV-QQKGH-------VCNPSFRASMLQA---REAFDNPDKDYGYYQQLAVNNGDCINA 116
            ::..:.|.. ::||.       ..||:.:||..|:   :...:.|:.:...::......|:...:
  Rat    68 ESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCAEEPEVEPEAHEGDGDKKGNAEGS 132

  Fly   117 EDLGLEYLVTED-------------LGNLLDE--QAATEQVVAEKDVNEQVAVEQN----VELNS 162
            .|...:.::.|.             .|::|::  :...|....|::..|..|:|..    ||:  
  Rat   133 SDEEGKLVIDEPAKEKNEKGMLKRRAGDMLEDSPKRPKESGDHEEEEKEIAALEGERPLPVEM-- 195

  Fly   163 LGQIFSNQEHEKDSEDSASNCQLEEKDQSNSEVVKEQVSER----HYSM 207
                   :::...||..:......|:::...|..||:...:    |.|:
  Rat   196 -------EKNSTPSEPDSGQGPPPEEEEGEEEAAKEEAEAQGVRDHESL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 28/96 (29%)
HdgfNP_446159.1 PWWP_HDGF 10..96 CDD:438976 25/85 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..237 28/176 (16%)
Nuclear localization signal. /evidence=ECO:0000250 75..80 0/4 (0%)
Bipartite nuclear localization signal. /evidence=ECO:0000250 155..170 2/14 (14%)

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