DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and Psip1

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_598709.1 Gene:Psip1 / 101739 MGIID:2142116 Length:528 Species:Mus musculus


Alignment Length:185 Identity:39/185 - (21%)
Similarity:68/185 - (36%) Gaps:70/185 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NFTIGDFVFAKLRRYRPWPGRI-----------LNRIGATAYSVYFYGSCNYAKVARKEVVDYEK 63
            :|..||.:|||::.|..||.|:           .|::     .::|:|:...|.:..|::..|.:
Mouse     4 DFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKL-----PIFFFGTHETAFLGPKDIFPYSE 63

  Fly    64 NLHRLGVVQQKGHVCNPSFRASMLQAREAFDNPDKDYGYYQQL-AVNNGDCINAEDLGLEYLVTE 127
            |                         :|.:..|:|..|:.:.| .::|...:             
Mouse    64 N-------------------------KEKYGKPNKRKGFNEGLWEIDNNPKV------------- 90

  Fly   128 DLGNLLDEQAATEQVVAEKDVNEQVAVEQNVELNSLGQIFSNQEHEKDSEDSASN 182
               ....:||:|:|..|..|| |....|.||           .:.:.|.|:.|||
Mouse    91 ---KFSSQQASTKQSNASSDV-EVEEKETNV-----------SKEDTDQEEKASN 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 17/90 (19%)
Psip1NP_598709.1 PWWP_PSIP 5..92 CDD:438979 23/132 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..348 24/123 (20%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O75475 146..156
Integrase-binding domain (IBD). /evidence=ECO:0000250|UniProtKB:O75475 338..415
LEDGF 347..448 CDD:463284
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..528
Blue background indicates that the domain is not in the aligned region.

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