DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9926 and psip1

DIOPT Version :10

Sequence 1:NP_650323.2 Gene:CG9926 / 41700 FlyBaseID:FBgn0038190 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_012811659.1 Gene:psip1 / 100145476 XenbaseID:XB-GENE-1007137 Length:589 Species:Xenopus tropicalis


Alignment Length:236 Identity:49/236 - (20%)
Similarity:91/236 - (38%) Gaps:64/236 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NFTIGDFVFAKLRRYRPWPGRI-----------LNRIGATAYSVYFYGSCNYAKVARKEVVDYEK 63
            :|..||.:|||::.|..||.|:           .|::     .::|:|:...|.:..|::..|::
 Frog     4 DFKPGDLIFAKMKGYPHWPARVDELPDGAVKPPTNKM-----PIFFFGTHETAFLGPKDIFPYDE 63

  Fly    64 NLHRLGVVQQKGHVCNPSFRASMLQAREAFDNPDKDYGYYQQL-AVNNGDCINAEDLGLEYLVTE 127
            |                         :|.:..|:|..|:.:.| .:.|...:..........:| 
 Frog    64 N-------------------------KEKYAKPNKRKGFNEGLWEIENNPKVKFSTPQNILAIT- 102

  Fly   128 DLGNLLDEQAATEQVVAEKDVNEQVAVEQNVELNS--LGQIFSNQEHEKDSEDSASNCQLEEKDQ 190
               |....:||..|:..:.:.||:...::.....|  ||         |.|:.|:|..:..|||.
 Frog   103 ---NAALREAAEAQMQEDLEENEEKVTKRRKSTTSKILG---------KHSDSSSSGLESPEKDM 155

  Fly   191 SNSEVVKEQVSERHYSMAQIVSLKSKKLMDTPINMTCQRRR 231
            :   ..||..|    ...|:.|..:..:.|:|:.:..:|.|
 Frog   156 N---ATKEDAS----ISDQLGSEDAGIIKDSPVVVKGRRGR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9926NP_650323.2 PWWP 14..94 CDD:459964 17/90 (19%)
psip1XP_012811659.1 PWWP_PSIP 5..92 CDD:438979 23/116 (20%)
PTZ00121 <267..572 CDD:173412
LEDGF 407..508 CDD:463284
Blue background indicates that the domain is not in the aligned region.

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