DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art6 and RID2

DIOPT Version :9

Sequence 1:NP_650322.1 Gene:Art6 / 41699 FlyBaseID:FBgn0038189 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_200538.1 Gene:RID2 / 835833 AraportID:AT5G57280 Length:289 Species:Arabidopsis thaliana


Alignment Length:173 Identity:40/173 - (23%)
Similarity:71/173 - (41%) Gaps:55/173 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FLEGKDSDYFQSYSRLETHMNMLRDSVRMQAFRD-------AIVQDGGLFQDKIVLDVGCGTGIL 68
            |.:..::..:.|.||:          |.:||...       |:.:||   ..:.:||:|||:|:.
plant    14 FYDDTEARKYTSSSRI----------VEIQAKLSERALELLALPEDG---VPRFLLDIGCGSGLS 65

  Fly    69 SLFAAEAG---------ASKV-IAVECTDIADIAEEIIRDNQKENVVKVVKGLVEQVELPDGIEK 123
            ....:|.|         ||.: :|||.....|:   ::.|        :.:||..:..:.||  .
plant    66 GETLSEDGHHWIGLDISASMLHVAVEREVEGDL---LLGD--------MGQGLGLRSGVIDG--A 117

  Fly   124 VDIIVSEWMGNA--------LYMEAMINSVLFARDKWLTRGGR 158
            :.|...:|:.||        |.::|...|:.    :.|:||.|
plant   118 ISISAVQWLCNADKSSHEPRLRLKAFFGSLY----RCLSRGAR 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art6NP_650322.1 AdoMet_MTases 29..>161 CDD:302624 36/155 (23%)
RID2NP_200538.1 UbiG 17..>92 CDD:332925 21/87 (24%)
Methyltransf_25 56..154 CDD:316196 27/114 (24%)
WBS_methylT 202..287 CDD:315297
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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