DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HB4

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_182018.1 Gene:HB4 / 819100 AraportID:AT2G44910 Length:318 Species:Arabidopsis thaliana


Alignment Length:61 Identity:26/61 - (42%)
Similarity:36/61 - (59%) Gaps:2/61 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 KRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            |::|  .|..|.|.||..|:.:..:...::.|||:.|||...||:|||||||.:.|..|.|
plant   163 KKLR--LSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTE 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 23/55 (42%)
HB4NP_182018.1 HD-ZIP_N 8..124 CDD:461370
Homeodomain 162..216 CDD:459649 23/54 (43%)
HALZ 218..261 CDD:128634 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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