Protein Alignment ems and Msx1

DIOPT Version :9

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_112321.2
• Gene: Msx1 / 81710
• RGDID: 620929
• Length: 303
• Species: Rattus norvegicus
• Alignment Length: 247
• Identity: 73/247 - (29%)
• Similarity: 96/247 - (38%)
• Gaps: 70/247 - (28%)

  Fly   261 MPPAGLVRPFPMG----------PGGPPMPQGQPGLPDIKALPPYIN---APPELPPQHNPHLIA 312
            |.||..:...|:|          |.|....|. ||.....|.....:   |.|::|....|..:
  Rat     1 MAPAAAMTSLPLGVKVEDSAFAKPAGGGAGQA-PGAAAATATAMGTDEEGAKPKVPASLLPFSV- 63

  Fly   313 AAQFQMAAALQAGH--------VLGPAAAAAAAAGLPPHA-----------AQFMPNP------- 351
                   .||.|.|        ||..:..|.||.|...|.           |...|.|
  Rat    64 -------EALMADHRKPGAKESVLVASEGAQAAGGSVQHLGTRPGSLGAPDAPSSPGPLGHFSVG 121

  Fly   352 GMAR------------DSYQLYPWLLSRHGRIFPHRFPGSFLVPP---FRKPK---RIRTAFSPS 398
            |:.:            :.....||:.|  .|..|.  |...|.||   .||.|   :.||.|:.:
  Rat   122 GLLKLPEDALVKAESPEKLDRTPWMQS--PRFSPP--PARRLSPPACTLRKHKTNRKPRTPFTTA 182

  Fly   399 QLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED 450
            |||.||..|...||:..|||...:.:|:|:|||||:||||||.|.||:|:.:
  Rat   183 QLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAE 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeobox	392..444	CDD:278475	28/51 (55%)
Msx1	NP_112321.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810