Protein Alignment ems and nanog

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001091862.1
• Gene: nanog / 792333
• ZFINID: ZDB-GENE-030131-5486
• Length: 384
• Species: Danio rerio
• Alignment Length: 384
• Identity: 73/384 - (19%)
• Similarity: 107/384 - (27%)
• Gaps: 152/384 - (39%)

  Fly    78 SPPHHLMAPPAHGLPYPHPHAQQQHLQAPHPHPHLS-PAQQHVLHQHLLMQQQHPGTPKSHQDIQ 141
            :|.:|..   |:||.||.        .:.|..|:|| |...:.
Zfish    13 NPSYHAY---AYGLMYPQ--------VSEHGVPNLSWPDAAYT---------------------- 44

  Fly   142 ELLQRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPK 206
                   |:..:.:|....||..||.........|....:.|.     .::|....:....|.|.
Zfish    45 -------HSGGVTAGYFTAQTAQSPPWSPENGGASSTYSQYPG-----HSQNGRLFLSYNKTEPD 97

  Fly   207 SVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMP------PAG 265
            ..:..:.|.||.           .|...:...|.::...:...          |:|      |:.
Zfish    98 QKAKDAEQTSSD-----------TPSDSEAHTPDSWSSASSRE----------GVPLTNLNLPSW 141

  Fly   266 LVRPFPMGPGGPPMPQGQPGLPDIKALPPY-----INAPPELPPQHNPHLIAAAQFQMAAALQAG 325
            ..|.:....|.|  ..|:..|.......|.     ::..|.||                 ||.|.
Zfish   142 RDRDYETDSGSP--DSGERNLTSTAGEEPVNLNLGVDTQPPLP-----------------ALTAS 187

  Fly   326 HVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKR 390
            .|..|..                                                       |::
Zfish   188 PVRPPTL-------------------------------------------------------PRK 197

  Fly   391 IRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            .|.|||..|:..|.:.|...:|:..||.|.||....|:..|||.||||||.|.||.|::
Zfish   198 TRAAFSEEQMNALVNRFNVQRYLTPAEMKTLAGATGLTYKQVKTWFQNRRMKLKRHQRD 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
nanog	NP_001091862.1	Homeodomain	196..252	CDD:459649	24/55 (44%)