DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and lbx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:172 Identity:52/172 - (30%)
Similarity:75/172 - (43%) Gaps:22/172 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 LPPYINAPPELPPQHNPHLIAAAQFQMAAAL-QAGHVLGPAAAAAAAAGLP--PHAAQFMPNPGM 353
            |||..|:...|.|.....::.....:.:..: ...|:|. .|....|||||  ..|.....:|..
 Frog    23 LPPPANSNKPLTPFSIEDILNKPSVRRSYTICGTAHLLS-TAEKPPAAGLPLSSRALLSQTSPLC 86

  Fly   354 ARDSYQLYPW-------LLSRHGR----IFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAF 407
            |.:......:       |.:..||    ||     |....|  :|.::.||||:..|:.:||..|
 Frog    87 ALEELASKTFKGLEVSVLQAAEGRDGMTIF-----GQRQTP--KKRRKSRTAFTNHQIYELEKRF 144

  Fly   408 ESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            ...:|:..|:|..:||.|.|:..||..||||||.|.||..:|
 Frog   145 LYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEE 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 24/55 (44%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 4/9 (44%)
Homeodomain 126..182 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265
Blue background indicates that the domain is not in the aligned region.

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