Protein Alignment ems and Nkx6-3

DIOPT Version :9

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001102925.1
• Gene: Nkx6-3 / 685102
• RGDID: 1597780
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 67/260 - (25%)
• Similarity: 97/260 - (37%)
• Gaps: 84/260 - (32%)

  Fly   261 MPPAGLVRPFPMGPGGPPMPQGQP-GLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQA 324
            :.|.||         ||.:..|.| |:.||.:.|.   |.|.                  ::|.:
  Rat    38 LSPPGL---------GPQLAAGTPHGITDILSRPV---ATPN------------------SSLLS 72

  Fly   325 G--HVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHR-----------F 376
            |  ||.|       ..||......:.|..|.           .|:.|..:|.|           :
  Rat    73 GYPHVAG-------FGGLSSQGVYYGPQVGS-----------FSKTGNEYPTRTRNCWADTGQDW 119

  Fly   377 PGSF---------LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQV 432
            .||.         |.....|.|..|..|:..|:..||..||..:|:.|.||..||.:|.::|:||
  Rat   120 RGSTRPCSNTPDPLSDTIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQV 184

  Fly   433 KVWFQNRRTKHKRMQQEDEK-------GGEGGSQRNMHNGSGDEDDDELIDMEMDECPSDEEHEL 490
            ||||||||||.::....:..       ||..|.:      :..|::|:..:..:|....||:..|
  Rat   185 KVWFQNRRTKWRKKSALEPSSSTPRAPGGASGDR------AASENEDDEYNKPLDPDSDDEKIRL 243

  Fly   491  490
              Rat   244  243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeobox	392..444	CDD:278475	27/51 (53%)
Nkx6-3	NP_001102925.1	Homeobox	143..197	CDD:395001	27/53 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810