Protein Alignment ems and Nkx3-2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001386451.1
• Gene: Nkx3-2 / 682329
• RGDID: 1584617
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 155
• Identity: 49/155 - (31%)
• Similarity: 64/155 - (41%)
• Gaps: 43/155 - (27%)

  Fly   325 GHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRH------GRIFPHRFPGSFLVP 383
            ||       |....||..|||:.:......|...::...:...|      |.:    .||...||
  Rat   117 GH-------ARVTLGLEQHAAKDLEEEARIRSDSEMSASVSGDHSPRGEDGSV----SPGGARVP 170

  Fly   384 --------------------------PFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALA 422
                                      |..:.||.|.|||.:|:.:||..|...:|:.|.||..||
  Rat   171 GLCGTAGGGASSGQAGGVEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLA 235

  Fly   423 QNLNLSETQVKVWFQNRRTKHKRMQ 447
            .:|.|:|||||:||||||.|.||.|
  Rat   236 ASLKLTETQVKIWFQNRRYKTKRRQ 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	30/55 (55%)
Nkx3-2	NP_001386451.1	Homeodomain	202..258	CDD:459649	30/55 (55%)