DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Barhl2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:323 Identity:93/323 - (28%)
Similarity:122/323 - (37%) Gaps:104/323 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 RSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKP 245
            ||.|.|      :|...|....|.|.|....:.:| ..|.|:...|.........|||||     
  Rat    45 RSQATP------SPCSEIDTVGTAPSSPISVTLEP-PEPHLVTDGPQHHHHLHHGQQPPP----- 97

  Fly   246 AMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHL 310
                         |..|||..::         |.||.||              ||:  ||     
  Rat    98 -------------PSAPPAQSLQ---------PSPQQQP--------------PPQ--PQ----- 119

  Fly   311 IAAAQFQMAAALQAGH----------VLG---PAAAAA---AAAGLPPHAAQFMPNPGMARDSYQ 359
             :||| |:.:|..|..          :||   |.||.|   .:...|.|..:...|  .|.:|::
  Rat   120 -SAAQ-QLGSAAAAPRTSTSSFLIKDILGDSKPLAACAPYSTSVSSPHHTPKQECN--AAHESFR 180

  Fly   360 LYPWL------------------LSRHG--RIFPHRFPGSFLVPPFR--KPKRIRTAFSPSQLLK 402
              |.|                  :..||  .........|...||.|  ||::.|||||..||.:
  Rat   181 --PKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFSDHQLNQ 243

  Fly   403 LEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR-----MQQEDEKGGEGGSQR 460
            ||.:||..:|:...:|..||..|||::||||.|:||||||.||     ::...|.|.....||
  Rat   244 LERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQR 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 37/145 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 19/86 (22%)
Homeodomain 230..286 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384
Blue background indicates that the domain is not in the aligned region.

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