Protein Alignment ems and hoxb6b

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571613.1
• Gene: hoxb6b / 58053
• ZFINID: ZDB-GENE-000823-7
• Length: 224
• Species: Danio rerio
• Alignment Length: 237
• Identity: 59/237 - (24%)
• Similarity: 89/237 - (37%)
• Gaps: 71/237 - (29%)

  Fly   270 FPMG-PGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQ------FQMAAALQAGHV 327
            ||:. |||.....||        :|.|.:...: ..:|.|.....|.      :..:...|||.|
Zfish    10 FPVSLPGGQESFLGQ--------IPLYSSGYTD-SLRHYPSATFGATNVQDKVYTSSYYQQAGGV 65

  Fly   328 LGPAAAAAAAAGLPPH---AAQFMPNPGMARDSYQL----------------------------Y 361
            .|.:.:.:|.....|:   :|......|...||..|                            |
Zfish    66 FGRSGSTSACDYSTPNIYRSADRSCAIGSLEDSLVLTQDQCKTDCTEQGTERYFSTEDKPCTPVY 130

  Fly   362 PWLL---SRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQ 423
            ||:.   |.:|      .|||       ..:|.|..::..|.|:||..|..|:|:....|..::.
Zfish   131 PWMQRMNSCNG------MPGS-------TGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISH 182

  Fly   424 NLNLSETQVKVWFQNRRTKHKRMQQ--------EDEKGGEGG 457
            .|.|:|.|:|:||||||.|.|:..:        ::|.||:.|
Zfish   183 ALCLTERQIKIWFQNRRMKWKKENKAVNSAKVSDEEDGGKAG 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	22/55 (40%)
hoxb6b	NP_571613.1	Antp-type hexapeptide	129..134		3/4 (75%)
		Homeodomain	148..204	CDD:459649	22/55 (40%)