Protein Alignment ems and hoxa9b

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571608.1
• Gene: hoxa9b / 58048
• ZFINID: ZDB-GENE-000823-2
• Length: 258
• Species: Danio rerio
• Alignment Length: 277
• Identity: 64/277 - (23%)
• Similarity: 99/277 - (35%)
• Gaps: 61/277 - (22%)

  Fly   201 PHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAM-------MHPGGAGPMMM 258
            ||.....::|:.   ||.|.:...|...|..:..:|:|.....|.::       :.|.||.....
Zfish    16 PHENDDHLAPRF---SSGPVVQQQSRELTLLEYSEQEPYTFQAKSSIFGASWSPVQPTGASIAYH 77

  Fly   259 P--------GMPPAGLVRPFPMGPGGPPMPQGQPGLP----------DIKALPPYINAPPELPPQ 305
            |        |......|||:.:.|        .|.||          ||| |.|.:.:     .:
Zfish    78 PYIHHPCSTGDSDGASVRPWALEP--------LPALPFTGLSTDTHQDIK-LEPLVGS-----GE 128

  Fly   306 HNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGR 370
            ...|.:..|:...........|...|.:..:.....|...:...:|........|..||.::..|
Zfish   129 CTTHTLLVAETDNNTTQTERKVPDDAVSNGSHDEKIPAETKLDLDPSKCNQDNPLSNWLHAKSTR 193

  Fly   371 IFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVW 435
                               :.|..::..|.|:||..|..|.|:....|..:|:.|||:|.|||:|
Zfish   194 -------------------KKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIW 239

  Fly   436 FQNRRTKHKRMQQEDEK 452
            |||||.|.|:..::..|
Zfish   240 FQNRRMKMKKCNKDRPK 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
hoxa9b	NP_571608.1	Hox9_act	1..174	CDD:461369	33/174 (19%)
		Homeodomain	193..249	CDD:459649	25/74 (34%)