DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and hoxb7a

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001108563.1 Gene:hoxb7a / 58044 ZFINID:ZDB-GENE-000329-2 Length:227 Species:Danio rerio


Alignment Length:176 Identity:48/176 - (27%)
Similarity:71/176 - (40%) Gaps:46/176 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 AGHVLG--PAAAAAAAAGLPPHAAQF-MPNPGMA-----------------------RDSYQLYP 362
            :.|..|  |.|....|..|..|::.| .||..|.                       .::.::||
Zfish    72 SSHTQGMYPTAYELGAVSLNMHSSLFDHPNLPMVSAGDLCKAQSSGKEEQRGYHQNNENNLRIYP 136

  Fly   363 WLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNL 427
            |:          |..|:       ..||.|..:|..|.|:||..|..|:|:....|..:|..|.|
Zfish   137 WM----------RSTGA-------DRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCL 184

  Fly   428 SETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGDEDDDE 473
            :|.|:|:||||||.|.|:..:..::......|   ..|..:|:|||
Zfish   185 TERQIKIWFQNRRMKWKKENKSTDRCSPAADQ---IGGDEEEEDDE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
hoxb7aNP_001108563.1 Antp-type hexapeptide 134..139 3/14 (21%)
Homeodomain 146..202 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..227 5/28 (18%)

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