Protein Alignment ems and hoxa13a

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001078963.1
• Gene: hoxa13a / 570239
• ZFINID: ZDB-GENE-990415-5
• Length: 310
• Species: Danio rerio
• Alignment Length: 308
• Identity: 60/308 - (19%)
• Similarity: 99/308 - (32%)
• Gaps: 123/308 - (39%)

  Fly   205 PKSVSPQSSQPSSSPTLLI---SSPHATPPQQQQQQPPPN-----------YPKPAMMHPGGAGP 255
            |.|::|.::.|||......   |....:|....|.....:           ||.....|.|..|.
Zfish    52 PASLAPSATYPSSEVAAAAAGDSGKQCSPCSAVQGSASASISYGYFGGGGYYPCRMSHHHGSGGG 116

  Fly   256 MMMPGMPPA----------------------------GLVRPFPMGPGGPPMPQGQPGLPDIKAL 292
            :......||                            .|...:...|..|              :
Zfish   117 VKTCAQSPASGSPYGEKYMDTSASTGEDYTSSRAKEFALYSSYASSPYQP--------------V 167

  Fly   293 PPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDS 357
            |.|::.|                     .:||  :.||:         .|.....:|     .:|
Zfish   168 PSYLDVP---------------------VVQA--ISGPS---------EPRHESLLP-----MES 195

  Fly   358 YQLYPWLLS---------------RHGRIFPHRFP---------GSFLVPPFRKPKRIRTAFSPS 398
            ||  ||.::               :.|.::....|         ||    .||:.::.|..::..
Zfish   196 YQ--PWAITTSGWNGQVYCTKEQQQTGNVWKSSIPESVSHGGADGS----SFRRGRKKRVPYTKV 254

  Fly   399 QLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRM 446
            ||.:||..:.:|:::...:|:.::...||||.||.:||||||.|.|::
Zfish   255 QLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKV 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	20/55 (36%)
hoxa13a	NP_001078963.1	HoxA13_N	29..148	CDD:463521	16/95 (17%)
		Homeodomain	245..301	CDD:459649	20/55 (36%)