DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and meox2b

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_073787071.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:329 Species:Danio rerio


Alignment Length:321 Identity:86/321 - (26%)
Similarity:121/321 - (37%) Gaps:71/321 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 IQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMP 262
            ::.||.|.:::.|..:|     .|...|.|.:.|......||.:|....... |||...      
Zfish    49 LRNPHAPSQALHPAFTQ-----ALHGRSDHISYPDLPGPSPPCSYAGEESSF-GGAHHR------ 101

  Fly   263 PAGLVRPFPMGPGGPPMPQGQ-PGLPDIKA------LPPYINAPPELPPQHNPHLIAAAQFQMAA 320
                |.|.|..|..|...|.. |.:|.|::      ||....|.|||                 .
Zfish   102 ----VHPAPQHPHHPQHHQWHVPQMPSIESERHGLCLPHPDAAAPEL-----------------C 145

  Fly   321 ALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRI-FPHRFPGSFLVPP 384
            ...||. .|..|......|..|.....:|.....::...:.|...|..|:. ......||:....
Zfish   146 GTGAGS-QGMCAGNPTLTGSDPSGVSCVPGEYGRQNMSPVEPERRSSKGKSDSSDSQDGSYKSDV 209

  Fly   385 FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            ..||::.||||:..|:.:||..|..:.|:....|..:|.||:|:|.||||||||||.|.||:   
Zfish   210 SSKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRV--- 271

  Fly   450 DEKGGEGGSQR------NMHNGSGDEDDDELIDMEMDE---------CPS--DEEHELDAS 493
              |||:.|:..      |:..|:       |:..|...         .||  |:.|:.|.|
Zfish   272 --KGGQQGAAAREKELVNVKKGT-------LLPSEFSPMVGLHHPIGSPSNEDDSHDSDQS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
meox2bXP_073787071.1 None

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