DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and pb

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_061500970.1 Gene:pb / 5667717 VectorBaseID:AGAMI1_011971 Length:790 Species:Anopheles gambiae


Alignment Length:169 Identity:51/169 - (30%)
Similarity:74/169 - (43%) Gaps:54/169 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 PPHAAQFMP-NPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRK-------------PKRI 391
            |....|.:| .|....:|...|||:..:               ...||             |:|:
Mosquito   138 PKLVTQGIPIGPSDNMESVPEYPWMKEK---------------KTARKATAQAEFVAENGLPRRL 187

  Fly   392 RTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRM---QQEDEKG 453
            |||::.:|||:||..|..|:|:....|..:|.:|:|:|.||||||||||.||||.   :.:|::.
Mosquito   188 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDDES 252

  Fly   454 GEGGSQRNMHNGSGDEDDDELIDMEMD------ECPSDE 486
            |:                |:|.|....      |.|||:
Mosquito   253 GK----------------DDLKDSNSKKSCQGCELPSDD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
pbXP_061500970.1 None

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