Protein Alignment ems and nkx6.3

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001159612.1
• Gene: nkx6.3 / 558978
• ZFINID: ZDB-GENE-070810-7
• Length: 272
• Species: Danio rerio
• Alignment Length: 237
• Identity: 66/237 - (27%)
• Similarity: 90/237 - (37%)
• Gaps: 44/237 - (18%)

  Fly   288 DIKALPPYINAPPEL----PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLP------- 341
            ||||.....:.|...    |...|..|.|.....::..|....|.|| ...|..:|.|
Zfish    21 DIKAPVCQYSIPNSFYKLGPANINSQLQAGTPHGISDILSRSMVSGP-GTPALLSGYPSMGGFGT 84

  Fly   342 --------------PHAAQFMPNP-----GMARDSYQL-----YPWLLSRH--GRIFPHRFPGSF 380
                          |......|.|     ||...|...     |.|..:|.  |....|. |.:
Zfish    85 TVPSPGVYYNRDYTPSGLSTFPKPVVECAGMKGKSSSCWVDGGYEWRGARQQCGNNMGHN-PEN- 147

  Fly   381 LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
                ..|.|..|..||..|:..||..||..:|:.|.||..||.:|.::|:||||||||||||.::
Zfish   148 ----VGKKKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 208

  Fly   446 MQQEDEKGGEGGSQRNMHNGSGDEDDDELIDMEMDECPSDEE 487
            ....:....:.....:..:||.:|.:||..:..:|....||:
Zfish   209 KSATEPSSTQTSRGESAGDGSENEVEDEEYNKPLDPDTDDEK 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
nkx6.3	NP_001159612.1	Homeodomain	150..208	CDD:459649	30/57 (53%)