DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and barx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001020120.1 Gene:barx1 / 553644 ZFINID:ZDB-GENE-050522-28 Length:248 Species:Danio rerio


Alignment Length:169 Identity:54/169 - (31%)
Similarity:80/169 - (47%) Gaps:22/169 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 PDIKALPPY-------INAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHA 344
            ||.|...|.       ::|.....|.|| ||:..|.       |.|.:..|.:..:.:.|.|..:
Zfish    38 PDQKVSSPTGDLLKFGVHALLSARPYHN-HLVLKAD-------QTGILKFPVSPLSCSLGAPLSS 94

  Fly   345 AQFMPNPGM--ARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAF 407
            |......|:  ...|:.| |..|...|::    .||:..|...:|.:|.||.|:..||:.||..|
Zfish    95 ALLSGAAGLQVGSSSHHL-PLDLHLRGKL----DPGADAVSKTKKGRRSRTVFTELQLMGLEKRF 154

  Fly   408 ESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRM 446
            |..:|:...:|..||::|.||:.|||.|:||||.|.|::
Zfish   155 EKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKI 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
barx1NP_001020120.1 Homeodomain 136..192 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..248
Blue background indicates that the domain is not in the aligned region.

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