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Protein Alignment ems and hoxc9
DIOPT Version :10
| Sequence 1: | NP_731868.1 |
Gene: | ems / 41697 |
FlyBaseID: | FBgn0000576 |
Length: | 494 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001017256.1 |
Gene: | hoxc9 / 550010 |
XenbaseID: | XB-GENE-482330 |
Length: | 100 |
Species: | Xenopus tropicalis |
| Alignment Length: | 119 |
Identity: | 22/119 - (18%) |
| Similarity: | 46/119 - (38%) |
Gaps: | 35/119 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 201 EPLQYLIASDANRLSLMVYARDPLVFFQKYNKEVVEFMNGHGFGGNVFWNSP----KPIYQGPDC 261
||:.: |.::..:.:...|: |..::: |:....|:.|| .|:|:...|
Frog 56 EPITF-----AGKMHFVPWLARPI--FPPWDR---------GYKDPRFYRSPPLHEHPLYKDQAC 104
Fly 262 EWPSEKEVFARRVLKNQEMNERNKNG---TSDPILSGMP--LADMIRDPKRTLE 310
.:|..|. .:.|..|.. |...::.|:| :..::.||:..:|
Frog 105 ------YIFHHRC----RLLEGVKQALWLTKTKLIEGLPEKVLSLVDDPRNHIE 148
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| ems | NP_731868.1 |
Homeodomain |
389..445 |
CDD:459649 |
|
| hoxc9 | NP_001017256.1 |
Homeodomain |
33..81 |
CDD:459649 |
5/40 (13%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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