Protein Alignment ems and hoxd1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001016678.1
• Gene: hoxd1 / 549432
• XenbaseID: XB-GENE-482731
• Length: 301
• Species: Xenopus tropicalis
• Alignment Length: 257
• Identity: 62/257 - (24%)
• Similarity: 94/257 - (36%)
• Gaps: 96/257 - (37%)

  Fly   267 VRPFP-MGPGGPPMPQGQPGLPDIKA-----LPPYINAPPEL-------PPQHNPHLIAAAQFQM 318
            ::|:| .|...|.||.|  |:|...|     ..|.:.||..|       ||.....|.::..:..
 Frog    30 LQPYPGSGADHPFMPVG--GVPGSVAHQASHQSPALYAPCSLDVAYEPPPPSDYSFLHSSTDYDY 92

  Fly   319 AAALQ-----AGHVLGPAAAAAAAAGLPPHAAQFMPNPG-----------------------MAR 355
            ..:..     .||:              |:.:...|..|                       ..:
 Frog    93 YGSNHLVEETGGHI--------------PYGSSVFPGNGSYILNGQLSYRTLGEETQMAQIAQCK 143

  Fly   356 DSYQLYPW--LLSRHGRIFPHRFPGSFLVP--------------------PFRK----------- 387
            :..::||.  |.|    |.|.  ||::..|                    |.:|
 Frog   144 EPLEVYPGGNLQS----ISPS--PGTYPKPASPASDTHVSTFDWMKVKRNPPKKSLQSEYGVASP 202

  Fly   388 PKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            |..:||.|:..||.:||..|..|:|:..|.|..:|.:|.|::||||:||||||.|.|:.::|
 Frog   203 PCTVRTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKRERE 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	26/55 (47%)
hoxd1	NP_001016678.1	Antp-type hexapeptide. /evidence=ECO:0000255	178..183		0/4 (0%)
		Homeodomain	207..260	CDD:459649	26/52 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	255..301		4/10 (40%)