Protein Alignment ems and hoxb4

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001116487.1
• Gene: hoxb4 / 548393
• XenbaseID: XB-GENE-1033882
• Length: 234
• Species: Xenopus tropicalis
• Alignment Length: 185
• Identity: 46/185 - (24%)
• Similarity: 73/185 - (39%)
• Gaps: 54/185 - (29%)

  Fly   302 LPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLP--------------PHAAQFMP--- 349
            ||..|:|......:.:  ::.|.|   .|.:.:.:::..|              ||::..:|
 Frog    29 LPSGHSPEYYGGQKRE--SSFQHG---APYSRSLSSSSAPYTSCQGSVRQGARLPHSSGLLPGEK 88

  Fly   350 -----------------------NPGMARDSYQLYPWLLSRH-GRIFPHRFPGSFLVPPFRKPKR 390
                                   :|........:|||:...| .|.......|        :.||
 Frog    89 AHLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWMKKAHISRASSTYSDG--------EAKR 145

  Fly   391 IRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            .|||::..|:|:||..|..|:|:....|..:|..|.|||.|:|:||||||.|.|:
 Frog   146 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKK 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)
hoxb4	NP_001116487.1	Homeodomain	144..200	CDD:459649	27/55 (49%)