DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Dlx6

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:284 Identity:81/284 - (28%)
Similarity:96/284 - (33%) Gaps:124/284 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 QQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYI 296
            |||||||||  |.|                ||             ||.|..|...|         
  Rat    43 QQQQQQPPP--PPP----------------PP-------------PPQPHSQQTSP--------- 67

  Fly   297 NAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQF----MPNPGMARDS 357
                                .||.|....|.|..|||||||||...|..|.    .|......:|
  Rat    68 --------------------AMAGAHYPLHCLHSAAAAAAAAGSHHHHHQHHHHGSPYASGGGNS 112

  Fly   358 Y--------------QLYPWLLSRH-----------------------GRIFPHRFPGSFLVPPF 385
            |              |..|:|.|.|                       |.|   ||.|.  ....
  Rat   113 YNHRSLAAYPYMSHSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEI---RFNGK--GKKI 172

  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED 450
            |||   ||.:|..||..|.|.|:..||:...||..||.:|.|::||||:||||:|:|.|::    
  Rat   173 RKP---RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKL---- 230

  Fly   451 EKGGEGGSQRNMHNGSGDEDDDEL 474
                       :..||...:.|.|
  Rat   231 -----------LKQGSNPHESDPL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
Dlx6NP_001414318.1 None

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