Protein Alignment ems and Hoxb4

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 264
• Identity: 78/264 - (29%)
• Similarity: 109/264 - (41%)
• Gaps: 58/264 - (21%)

  Fly   220 TLLISSPHAT---PPQQQQQQPPPNYPKPAMMHPG--GAGPMMMPG-MPPAGLVRPFP------- 271
            :.||:|.:..   ||.::..|  .:| .|:...||  ..|.....| .|.|...|..|
  Rat     5 SFLINSNYVDPKFPPCEEYSQ--SDY-LPSDHSPGYYAGGQRRESGFQPEAAFGRRAPCTVQRYA 66

  Fly   272 --MGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVL---GPA 331
              ..||.||.|            ||    ||..||   |.|...|..|..    ||.:|   |..
  Rat    67 ACRDPGPPPPP------------PP----PPPPPP---PGLSPRAPVQST----AGALLPEPGQR 108

  Fly   332 AAAAAAAGLPPHAAQFMPNPGMARDSYQ---LYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRT 393
            :...:::..||..||...:|..:..:.:   :|||:...|.......:.|.       :|||.||
  Rat   109 SEVVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGG-------EPKRSRT 166

  Fly   394 AFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK----HKRMQQEDEKGG 454
            |::..|:|:||..|..|:|:....|..:|..|.|||.|:|:||||||.|    ||....:...||
  Rat   167 AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGG 231

  Fly   455 EGGS 458
            ..|:
  Rat   232 TAGA 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	28/59 (47%)
Hoxb4	NP_001094257.1	Homeodomain	162..218	CDD:459649	27/55 (49%)