DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and alx4b

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001297007.2 Gene:alx4b / 497424 ZFINID:ZDB-GENE-050208-140 Length:364 Species:Danio rerio


Alignment Length:289 Identity:70/289 - (24%)
Similarity:98/289 - (33%) Gaps:93/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SPAPPA---MEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLIS----------SP-HATPPQ 232
            |||.|.   ::|| ||.:..            |||....|||.|.:          || |...|.
Zfish    20 SPAAPGQGRVQQA-NPYRTF------------QSSDSKYSPTFLPAKGQTYGEKPRSPFHQDCPT 71

  Fly   233 QQQQQPPPNYPK--PAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPY 295
            .........|.|  ..|..|....|.....:....|:..:  |..|       .||.|       
Zfish    72 LDDSTAEGAYSKYHLFMQRPACKSPSEDSKLEDGALISCY--GKDG-------TGLTD------- 120

  Fly   296 INAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQL 360
                .::|...:|           .||....:      :...|||...:.:.:.:.|.|.|..:.
Zfish   121 ----TDMPQSADP-----------TALDGSFI------SVKDAGLKGQSDRPVSDIGSALDKSEA 164

  Fly   361 YPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNL 425
            .    |..|                 |.:|.||.|:..||.:||..|:...|.....|:.||...
Zfish   165 E----SNKG-----------------KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRT 208

  Fly   426 NLSETQVKVWFQNRRTKHKR------MQQ 448
            :|:|.:|:|||||||.|.::      |||
Zfish   209 DLTEARVQVWFQNRRAKWRKRERFGQMQQ 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 24/55 (44%)
alx4bNP_001297007.2 None

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